RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 TUBA4AP68366 448 aa16.96■□□□□ 0.31
SMPD1-208ENST00000533123 RBM48Q5RL73 367 aaKnown RBP16.96■□□□□ 0.31
SMPD1-208ENST00000533123 MEX3DQ86XN8 651 aaKnown RBP16.96■□□□□ 0.31
SMPD1-208ENST00000533123 ZNF248Q8NDW4 579 aa16.96■□□□□ 0.31
SMPD1-208ENST00000533123 ADAMTS16Q8TE57 1224 aa16.96■□□□□ 0.31
SMPD1-208ENST00000533123 TMIGD2Q96BF3 282 aa16.96■□□□□ 0.31
SMPD1-208ENST00000533123 OMA1Q96E52 524 aa16.96■□□□□ 0.31
SMPD1-208ENST00000533123 MCHR1Q99705 422 aa16.96■□□□□ 0.31
SMPD1-208ENST00000533123 TRIM64CA6NLI5 447 aa16.96■□□□□ 0.3
SMPD1-208ENST00000533123 XPNPEP2O43895 674 aa16.96■□□□□ 0.3
SMPD1-208ENST00000533123 MAN1A2O60476 641 aa16.96■□□□□ 0.3
SMPD1-208ENST00000533123 IL33O95760 270 aa16.96■□□□□ 0.3
SMPD1-208ENST00000533123 ADAP00813 363 aa16.96■□□□□ 0.3
SMPD1-208ENST00000533123 THY1P04216 161 aa16.96■□□□□ 0.3
SMPD1-208ENST00000533123 IGFBP1P08833 259 aaPredicted RBP16.96■□□□□ 0.3
SMPD1-208ENST00000533123 ZNF136P52737 540 aa16.96■□□□□ 0.3
SMPD1-208ENST00000533123 PIGFQ07326 219 aa16.96■□□□□ 0.3
SMPD1-208ENST00000533123 MAD2L1BPQ15013 274 aaPredicted RBP16.96■□□□□ 0.3
SMPD1-208ENST00000533123 SMN1Q16637 294 aaKnown RBP16.96■□□□□ 0.3
SMPD1-208ENST00000533123 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.96■□□□□ 0.3
SMPD1-208ENST00000533123 EIPR1Q53HC9 387 aa16.96■□□□□ 0.3
SMPD1-208ENST00000533123 PDZK1Q5T2W1 519 aa16.96■□□□□ 0.3
SMPD1-208ENST00000533123 TMEM236Q5W0B7 351 aa16.96■□□□□ 0.3
SMPD1-208ENST00000533123 ENTHD1Q8IYW4 607 aa16.96■□□□□ 0.3
SMPD1-208ENST00000533123 SLC34A3Q8N130 599 aa16.96■□□□□ 0.3
SMPD1-208ENST00000533123 PARP8Q8N3A8 854 aa16.96■□□□□ 0.3
SMPD1-208ENST00000533123 ZNF614Q8N883 585 aa16.96■□□□□ 0.3
SMPD1-208ENST00000533123 BPIFB6Q8NFQ5 453 aa16.96■□□□□ 0.3
SMPD1-208ENST00000533123 OR4K5Q8NGD3 323 aa16.96■□□□□ 0.3
SMPD1-208ENST00000533123 OR4C3Q8NH37 302 aa16.96■□□□□ 0.3
SMPD1-208ENST00000533123 ZBTB20Q9HC78 741 aaPredicted RBP16.96■□□□□ 0.3
SMPD1-208ENST00000533123 NPFFR2Q9Y5X5 522 aa16.96■□□□□ 0.3
SMPD1-208ENST00000533123 CACNA1AO00555 2505 aa16.95■□□□□ 0.3
SMPD1-208ENST00000533123 CDHR4A6H8M9 788 aa16.95■□□□□ 0.3
SMPD1-208ENST00000533123 AP3D1O14617 1153 aa16.95■□□□□ 0.3
SMPD1-208ENST00000533123 TRMUO75648 421 aaKnown RBP16.95■□□□□ 0.3
SMPD1-208ENST00000533123 CYP7B1O75881 506 aa16.95■□□□□ 0.3
SMPD1-208ENST00000533123 SOX14O95416 240 aa16.95■□□□□ 0.3
SMPD1-208ENST00000533123 SERPINA7P05543 415 aa16.95■□□□□ 0.3
SMPD1-208ENST00000533123 ADRB1P08588 477 aa16.95■□□□□ 0.3
SMPD1-208ENST00000533123 KRT20P35900 424 aa16.95■□□□□ 0.3
SMPD1-208ENST00000533123 GGT2P36268 569 aa16.95■□□□□ 0.3
SMPD1-208ENST00000533123 PLEKHM3Q6ZWE6 761 aa16.95■□□□□ 0.3
SMPD1-208ENST00000533123 SIRT6Q8N6T7 355 aa16.95■□□□□ 0.3
SMPD1-208ENST00000533123 UCK2Q9BZX2 261 aa16.95■□□□□ 0.3
SMPD1-208ENST00000533123 CDCP1Q9H5V8 836 aa16.95■□□□□ 0.3
SMPD1-208ENST00000533123 POLE3Q9NRF9 147 aa16.95■□□□□ 0.3
SMPD1-208ENST00000533123 PAK1IP1Q9NWT1 392 aaPredicted RBP16.95■□□□□ 0.3
SMPD1-208ENST00000533123 TUBA8Q9NY65 449 aaPredicted RBP16.95■□□□□ 0.3
SMPD1-208ENST00000533123 FLRT3Q9NZU0 649 aa16.95■□□□□ 0.3
SMPD1-208ENST00000533123 REV1Q9UBZ9 1251 aa16.95■□□□□ 0.3
SMPD1-208ENST00000533123 MRTO4Q9UKD2 239 aaKnown RBP16.95■□□□□ 0.3
SMPD1-208ENST00000533123 M0R129 80 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 TSPAN2O60636 221 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 ITGA10O75578 1167 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 NADKO95544 446 aaPredicted RBP16.94■□□□□ 0.3
SMPD1-208ENST00000533123 ANGPTL1O95841 491 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 CHMP24386 653 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 IL12BP29460 328 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 IDH2P48735 452 aaKnown RBP16.94■□□□□ 0.3
SMPD1-208ENST00000533123 UGT2B15P54855 530 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 PSMD4P55036 377 aaKnown RBP16.94■□□□□ 0.3
SMPD1-208ENST00000533123 ZER1Q7Z7L7 766 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 RPS19BP1Q86WX3 136 aaKnown RBP16.94■□□□□ 0.3
SMPD1-208ENST00000533123 BRIX1Q8TDN6 353 aaKnown RBP16.94■□□□□ 0.3
SMPD1-208ENST00000533123 APH1BQ8WW43 257 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 THOC3Q96J01 351 aaKnown RBP16.94■□□□□ 0.3
SMPD1-208ENST00000533123 GPA33Q99795 319 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 MGAT4BQ9UQ53 548 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 RNF6Q9Y252 685 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 HSPE1-MOB4S4R3N1 261 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 A0A087WUU8 490 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 HTR1AP08908 422 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 PTNP21246 168 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 POU1F1P28069 291 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 HTR2AP28223 471 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 ALDH3B2P48448 385 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 PTGES3Q15185 160 aaKnown RBP16.94■□□□□ 0.3
SMPD1-208ENST00000533123 B3GNTL1Q67FW5 361 aaPredicted RBP16.94■□□□□ 0.3
SMPD1-208ENST00000533123 GDF7Q7Z4P5 450 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 OR5M3Q8NGP4 307 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 FER1L6-AS2Q96M78 137 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 RASL10BQ96S79 203 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 RHNO1Q9BSD3 238 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 ATP13A2Q9NQ11 1180 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 IGF2RP11717 2491 aa16.94■□□□□ 0.3
SMPD1-208ENST00000533123 URB1O60287 2271 aaKnown RBP16.94■□□□□ 0.3
SMPD1-208ENST00000533123 PTGES3LE9PB15 166 aa16.93■□□□□ 0.3
SMPD1-208ENST00000533123 EFSO43281 561 aa16.93■□□□□ 0.3
SMPD1-208ENST00000533123 ABCB7O75027 752 aa16.93■□□□□ 0.3
SMPD1-208ENST00000533123 WBP4O75554 376 aaKnown RBP16.93■□□□□ 0.3
SMPD1-208ENST00000533123 ZNF773Q6PK81 442 aa16.93■□□□□ 0.3
SMPD1-208ENST00000533123 NKAIN4Q8IVV8 208 aa16.93■□□□□ 0.3
SMPD1-208ENST00000533123 hCG_2014768A0A024R1R8 64 aa16.93■□□□□ 0.3
SMPD1-208ENST00000533123 ARGFXA6NJG6 315 aa16.93■□□□□ 0.3
SMPD1-208ENST00000533123 GUSBP08236 651 aa16.93■□□□□ 0.3
SMPD1-208ENST00000533123 CRISP1P54107 249 aa16.93■□□□□ 0.3
SMPD1-208ENST00000533123 ATP12AP54707 1039 aa16.93■□□□□ 0.3
SMPD1-208ENST00000533123 NUP107P57740 925 aa16.93■□□□□ 0.3
SMPD1-208ENST00000533123 FBXW4P57775 412 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms