RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 TMEM234Q8WY98 164 aa13.64□□□□□ -0.23
SF3B2-202ENST00000524475 RND1Q92730 232 aa13.64□□□□□ -0.23
SF3B2-202ENST00000524475 MAL2Q969L2 176 aa13.64□□□□□ -0.23
SF3B2-202ENST00000524475 LRRC58Q96CX6 371 aa13.64□□□□□ -0.23
SF3B2-202ENST00000524475 KLHDC3Q9BQ90 382 aa13.64□□□□□ -0.23
SF3B2-202ENST00000524475 FAM107BQ9H098 131 aa13.64□□□□□ -0.23
SF3B2-202ENST00000524475 CACYBPQ9HB71 228 aaKnown RBP13.64□□□□□ -0.23
SF3B2-202ENST00000524475 GID8Q9NWU2 228 aa13.64□□□□□ -0.23
SF3B2-202ENST00000524475 DNAJB12Q9NXW2 375 aaKnown RBP13.64□□□□□ -0.23
SF3B2-202ENST00000524475 ARMCX1Q9P291 453 aa13.64□□□□□ -0.23
SF3B2-202ENST00000524475 CACNA1CQ13936 2221 aa13.64□□□□□ -0.23
SF3B2-202ENST00000524475 DOCK7Q96N67 2140 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 CDHR4A6H8M9 788 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 C5orf58C9J3I9 102 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 H0Y3Z8 333 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 SHOX2O60902 331 aaPredicted RBP13.63□□□□□ -0.23
SF3B2-202ENST00000524475 NUDT14O95848 222 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 SLC6A2P23975 617 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 PRDX6P30041 224 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 CEACAM8P31997 349 aaPredicted RBP13.63□□□□□ -0.23
SF3B2-202ENST00000524475 EEF1A1P68104 462 aaKnown RBP13.63□□□□□ -0.23
SF3B2-202ENST00000524475 FOXF1Q12946 379 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 NDUFAF6Q330K2 333 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 NANOGP8Q6NSW7 305 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 SEM1Q6ZVN7 128 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 PTOV1Q86YD1 416 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 SLC30A8Q8IWU4 369 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 TMCO5AQ8N6Q1 288 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 C11orf65Q8NCR3 313 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 HIPK4Q8NE63 616 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 RNF145Q96MT1 663 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 ZFP3Q96NJ6 502 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 TUBA1CQ9BQE3 449 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 THUMPD3Q9BV44 507 aaKnown RBP13.63□□□□□ -0.23
SF3B2-202ENST00000524475 ARMC7Q9H6L4 198 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 NANOGQ9H9S0 305 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 ACER3Q9NUN7 267 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 PAQR5Q9NXK6 330 aaPredicted RBP13.63□□□□□ -0.23
SF3B2-202ENST00000524475 COQ3Q9NZJ6 369 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 CLCF1Q9UBD9 225 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 ZNF232Q9UNY5 417 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 ZNF443Q9Y2A4 671 aaPredicted RBP13.63□□□□□ -0.23
SF3B2-202ENST00000524475 AP3M1Q9Y2T2 418 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 ARL2BPQ9Y2Y0 163 aa13.63□□□□□ -0.23
SF3B2-202ENST00000524475 KLF2Q9Y5W3 355 aaPredicted RBP13.63□□□□□ -0.23
SF3B2-202ENST00000524475 LOC100653049A0A140TA62 436 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 CLDN24A6NM45 220 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 GMFGO60234 142 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 BCAS1O75363 584 aaPredicted RBP13.62□□□□□ -0.23
SF3B2-202ENST00000524475 KRT34O76011 436 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 PABPC4LP0CB38 370 aaKnown RBP13.62□□□□□ -0.23
SF3B2-202ENST00000524475 COX4I1P13073 169 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 ME2P23368 584 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 CHRNB4P30926 498 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 PRKAR1BP31321 381 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 STARP49675 285 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 RNF144AP50876 292 aaPredicted RBP13.62□□□□□ -0.23
SF3B2-202ENST00000524475 GZMMP51124 257 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 CCR4P51679 360 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 CLDN15P56746 228 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 PCBP3P57721 371 aaKnown RBP13.62□□□□□ -0.23
SF3B2-202ENST00000524475 MTPNP58546 118 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 RPS3AP61247 264 aaKnown RBP13.62□□□□□ -0.23
SF3B2-202ENST00000524475 PMPCAQ10713 525 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 SELENBP1Q13228 472 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 SCARB2Q14108 478 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 SELPLGQ14242 412 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 QPRTQ15274 297 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 TOMM34Q15785 309 aaPredicted RBP13.62□□□□□ -0.23
SF3B2-202ENST00000524475 RPS26P11Q5JNZ5 115 aaPredicted RBP13.62□□□□□ -0.23
SF3B2-202ENST00000524475 MRPL2Q5T653 305 aaKnown RBP13.62□□□□□ -0.23
SF3B2-202ENST00000524475 FAM91A1Q658Y4 838 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 HACD2Q6Y1H2 254 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 ESPNLQ6ZVH7 1005 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 ARPINQ7Z6K5 226 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 GGNQ86UU5 652 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 KRT73Q86Y46 540 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 TREML1Q86YW5 311 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 BHLHE22Q8NFJ8 381 aaPredicted RBP13.62□□□□□ -0.23
SF3B2-202ENST00000524475 NFKBIDQ8NI38 313 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 CNOT9Q92600 299 aaKnown RBP13.62□□□□□ -0.23
SF3B2-202ENST00000524475 CMTM5Q96DZ9 223 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 ADGRG7Q96K78 797 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 SPATA5L1Q9BVQ7 753 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 ALKBH4Q9NXW9 302 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 ZNF175Q9Y473 711 aa13.62□□□□□ -0.23
SF3B2-202ENST00000524475 GJE1A6NN92 205 aa13.61□□□□□ -0.23
SF3B2-202ENST00000524475 CLCA1A8K7I4 914 aa13.61□□□□□ -0.23
SF3B2-202ENST00000524475 HSPB2A8KAH6 182 aa13.61□□□□□ -0.23
SF3B2-202ENST00000524475 H3BML4 177 aa13.61□□□□□ -0.23
SF3B2-202ENST00000524475 ADAMDEC1O15204 470 aa13.61□□□□□ -0.23
SF3B2-202ENST00000524475 CLDN14O95500 239 aa13.61□□□□□ -0.23
SF3B2-202ENST00000524475 FAM107AO95990 144 aa13.61□□□□□ -0.23
SF3B2-202ENST00000524475 UQCRBP14927 111 aa13.61□□□□□ -0.23
SF3B2-202ENST00000524475 TCEA1P23193 301 aaKnown RBP13.61□□□□□ -0.23
SF3B2-202ENST00000524475 FKBP2P26885 142 aaKnown RBP13.61□□□□□ -0.23
SF3B2-202ENST00000524475 PCGF2P35227 344 aa13.61□□□□□ -0.23
SF3B2-202ENST00000524475 CLDN20P56880 219 aa13.61□□□□□ -0.23
SF3B2-202ENST00000524475 SESN3P58005 492 aa13.61□□□□□ -0.23
SF3B2-202ENST00000524475 CAPRIN1Q14444 709 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms