RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 UCN2Q96RP3 112 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 THUMPD3Q9BV44 507 aaKnown RBP11.3□□□□□ -0.6
CCNC-216ENST00000523961 IKZF5Q9H5V7 419 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 TMEM38AQ9H6F2 299 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 EXOSC3Q9NQT5 275 aaKnown RBP11.3□□□□□ -0.6
CCNC-216ENST00000523961 ZNF232Q9UNY5 417 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 IFT52Q9Y366 437 aa11.3□□□□□ -0.6
CCNC-216ENST00000523961 KLF2Q9Y5W3 355 aaPredicted RBP11.3□□□□□ -0.6
CCNC-216ENST00000523961 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 A0A0G2JNJ9 132 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 LOC100653049A0A140TA62 436 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 MBD3L4A6NDZ8 208 aaPredicted RBP11.29□□□□□ -0.6
CCNC-216ENST00000523961 MBD3L3A6NE82 208 aaPredicted RBP11.29□□□□□ -0.6
CCNC-216ENST00000523961 MBD3L5A6NJ08 208 aaPredicted RBP11.29□□□□□ -0.6
CCNC-216ENST00000523961 CLDN24A6NM45 220 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 CLCA1A8K7I4 914 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 ETV2O00321 342 aaPredicted RBP11.29□□□□□ -0.6
CCNC-216ENST00000523961 MRASO14807 208 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 SEC14L5O43304 696 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 SNX3O60493 162 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 KRT34O76011 436 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 PGM3O95394 542 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 THBS1P07996 1170 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 ETS2P15036 469 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 PRKCAP17252 672 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 CEACAM8P31997 349 aaPredicted RBP11.29□□□□□ -0.6
CCNC-216ENST00000523961 SLC6A8P48029 635 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 SUCLG1P53597 346 aaKnown RBP11.29□□□□□ -0.6
CCNC-216ENST00000523961 CLDN20P56880 219 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 CDK6Q00534 326 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 QPRTQ15274 297 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 TOMM34Q15785 309 aaPredicted RBP11.29□□□□□ -0.6
CCNC-216ENST00000523961 LIN52Q52LA3 116 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 SLC25A53Q5H9E4 307 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 RPS26P11Q5JNZ5 115 aaPredicted RBP11.29□□□□□ -0.6
CCNC-216ENST00000523961 MRPL2Q5T653 305 aaKnown RBP11.29□□□□□ -0.6
CCNC-216ENST00000523961 REEP3Q6NUK4 255 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 GRAMD2AQ8IUY3 354 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 ZNF440Q8IYI8 595 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 PCYOX1LQ8NBM8 494 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 LILRB4Q8NHJ6 448 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 MBD3L2Q8NHZ7 208 aaPredicted RBP11.29□□□□□ -0.6
CCNC-216ENST00000523961 FBXO27Q8NI29 283 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 NFKBIDQ8NI38 313 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 RP9Q8TA86 221 aaKnown RBP11.29□□□□□ -0.6
CCNC-216ENST00000523961 CNOT9Q92600 299 aaKnown RBP11.29□□□□□ -0.6
CCNC-216ENST00000523961 WNT2BQ93097 391 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 NPAS1Q99742 590 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 TM9SF2Q99805 663 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 ARMC7Q9H6L4 198 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 ACER3Q9NUN7 267 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 ARMCX1Q9P291 453 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 CLCF1Q9UBD9 225 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 Q9UFV3 132 aa11.29□□□□□ -0.6
CCNC-216ENST00000523961 FLNBO75369 2602 aaKnown RBP11.29□□□□□ -0.6
CCNC-216ENST00000523961 KDM4EB2RXH2 506 aaPredicted RBP11.28□□□□□ -0.6
CCNC-216ENST00000523961 PRSS44E7EML9 344 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 BCAS1O75363 584 aaPredicted RBP11.28□□□□□ -0.6
CCNC-216ENST00000523961 TOXO94900 526 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 NTN1O95631 604 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 SLC6A2P23975 617 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 HTR1EP28566 365 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 RYKP34925 604 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 CLDN15P56746 228 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 SESN3P58005 492 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 MTPNP58546 118 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 RBBP4Q09028 425 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 SCARB2Q14108 478 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 CAPRIN1Q14444 709 aaKnown RBP11.28□□□□□ -0.6
CCNC-216ENST00000523961 CYP51A1Q16850 503 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 PDSS1Q5T2R2 415 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 RNF220Q5VTB9 566 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 REP15Q6BDI9 236 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 MTDHQ86UE4 582 aaKnown RBP11.28□□□□□ -0.6
CCNC-216ENST00000523961 GGNQ86UU5 652 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 VRK2Q86Y07 508 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 KRT73Q86Y46 540 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 C10orf111Q8N326 155 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 C11orf65Q8NCR3 313 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 TNIP2Q8NFZ5 429 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 ZNF563Q8TA94 476 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 MARVELD3Q96A59 401 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 LRRC58Q96CX6 371 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 ZFP3Q96NJ6 502 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 SH3GL1Q99961 368 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 SPATA9Q9BWV2 254 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 CHST11Q9NPF2 352 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 GID8Q9NWU2 228 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 PAQR5Q9NXK6 330 aaPredicted RBP11.28□□□□□ -0.6
CCNC-216ENST00000523961 DNAJB12Q9NXW2 375 aaKnown RBP11.28□□□□□ -0.6
CCNC-216ENST00000523961 PRDM4Q9UKN5 801 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 ZNF443Q9Y2A4 671 aaPredicted RBP11.28□□□□□ -0.6
CCNC-216ENST00000523961 HECTD1Q9ULT8 2610 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 COL12A1Q99715 3063 aa11.28□□□□□ -0.6
CCNC-216ENST00000523961 HEATR5AQ86XA9 2040 aa11.27□□□□□ -0.61
CCNC-216ENST00000523961 CDHR4A6H8M9 788 aa11.27□□□□□ -0.61
CCNC-216ENST00000523961 CFAP73A6NFT4 308 aa11.27□□□□□ -0.61
CCNC-216ENST00000523961 SLC22A20A6NK97 555 aa11.27□□□□□ -0.61
CCNC-216ENST00000523961 GJE1A6NN92 205 aa11.27□□□□□ -0.61
CCNC-216ENST00000523961 H0YC42 278 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms