RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 KIAA1143Q96AT1 154 aaPredicted RBP12.94□□□□□ -0.34
SYNPO-205ENST00000522122 MYEOVQ96EZ4 313 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 C4orf36Q96KX1 117 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 INPP5EQ9NRR6 644 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 GMEB2Q9UKD1 530 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 NUP205Q92621 2012 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 A0A0G2JMP0 313 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 A6NIN4 97 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 EEF1E1-BLOC1S5C9J1V9 151 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 ACOT7O00154 380 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 LILRB3O75022 631 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 LDB3O75112 727 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 TRAPPC2P0DI81 140 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 TRAPPC2BP0DI82 140 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 RABIFP47224 123 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 PFN3P60673 137 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 CHRNEQ04844 493 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 SF3B4Q15427 424 aaKnown RBP eCLIP12.93□□□□□ -0.34
SYNPO-205ENST00000522122 CCNJQ5T5M9 372 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 CLDN22Q8N7P3 220 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 ZNF740Q8NDX6 193 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 OR4M2Q8NGB6 313 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 NEDD4LQ96PU5 975 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 SLC5A7Q9GZV3 580 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 H7C417 338 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 PEX12O00623 359 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 RDH16O75452 317 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 RAD51DO75771 328 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 F11P03951 625 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 GYPBP06028 91 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 ZDHHC11BP0C7U3 371 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 MRPS10P82664 201 aaKnown RBP12.93□□□□□ -0.34
SYNPO-205ENST00000522122 TIAL1Q01085 375 aaKnown RBP eCLIP12.93□□□□□ -0.34
SYNPO-205ENST00000522122 ZNF765Q7L2R6 523 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 TMEM151BQ8IW70 566 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 MFSD4AQ8N468 514 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 OR5L2Q8NGL0 311 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 ZDHHC1Q8WTX9 485 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 MARCH5Q9NX47 278 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 ATXN7L1Q9ULK2 861 aaPredicted RBP12.93□□□□□ -0.34
SYNPO-205ENST00000522122 ZNFX1Q9P2E3 1918 aaKnown RBP12.93□□□□□ -0.34
SYNPO-205ENST00000522122 PBX2P40425 430 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 SLC19A1P41440 591 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 CARD17Q5XLA6 110 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 LRRC69Q6ZNQ3 347 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 NLGN4XQ8N0W4 816 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 MRPL43Q8N983 215 aaKnown RBP12.93□□□□□ -0.34
SYNPO-205ENST00000522122 ADAMTS14Q8WXS8 1223 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 NECAB3Q96P71 396 aaPredicted RBP12.93□□□□□ -0.34
SYNPO-205ENST00000522122 C7orf50Q9BRJ6 194 aaKnown RBP12.93□□□□□ -0.34
SYNPO-205ENST00000522122 TIMM29Q9BSF4 260 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 EGLN3Q9H6Z9 239 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 C2orf42Q9NWW7 574 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 PIAS3Q9Y6X2 628 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 CROCCQ5TZA2 2017 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 TRIP11Q15643 1979 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 SLC22A5O76082 557 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 PROS1P07225 676 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 SYPP08247 313 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 CD34P28906 385 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 TGFBR1P36897 503 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 P2RY2P41231 377 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 SNRPGP62308 76 aaKnown RBP12.93□□□□□ -0.34
SYNPO-205ENST00000522122 MFSD13AQ14CX5 517 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 BTLAQ7Z6A9 289 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 OR5K2Q8NHB8 316 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 KCMF1Q9P0J7 381 aa12.93□□□□□ -0.34
SYNPO-205ENST00000522122 ARPC5O15511 151 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 AKR1C4P17516 323 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 SLC6A12P48065 614 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 CDK10Q15131 360 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 TSC22D1Q15714 1073 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 COX20Q5RI15 118 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 FAM69AQ5T7M9 428 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 CHTF18Q8WVB6 975 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 GDE1Q9NZC3 331 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 UPK1AO00322 258 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 PSMB10P40306 273 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 SERPINA12Q8IW75 414 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 CD300LFQ8TDQ1 290 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 SLC25A44Q96H78 314 aaPredicted RBP12.92□□□□□ -0.34
SYNPO-205ENST00000522122 CDCA4Q9BXL8 241 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 ERVK-19Q9WJR5 959 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 ZNF443Q9Y2A4 671 aaPredicted RBP12.92□□□□□ -0.34
SYNPO-205ENST00000522122 GABRPO00591 440 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 EGFP01133 1207 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 HNRNPKP61978 463 aaKnown RBP eCLIP12.92□□□□□ -0.34
SYNPO-205ENST00000522122 METAP1DQ6UB28 335 aaPredicted RBP12.92□□□□□ -0.34
SYNPO-205ENST00000522122 GSG1LQ6UXU4 331 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 SNAPC3Q92966 411 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 OR1F2PQ96R84 312 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 CXorf36Q9H7Y0 433 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 RANGRFQ9HD47 186 aaPredicted RBP12.92□□□□□ -0.34
SYNPO-205ENST00000522122 SLC7A11Q9UPY5 501 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 TRAV27A0A087WT01 109 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 A0A0A6YYC8 382 aaPredicted RBP12.92□□□□□ -0.34
SYNPO-205ENST00000522122 I3L1I5 382 aaPredicted RBP12.92□□□□□ -0.34
SYNPO-205ENST00000522122 ARPC1BO15143 372 aaKnown RBP12.92□□□□□ -0.34
SYNPO-205ENST00000522122 OR7A10O76100 309 aa12.92□□□□□ -0.34
SYNPO-205ENST00000522122 RAB3DO95716 219 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms