RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 ANKRA2Q9H9E1 313 aa5.68□□□□□ -1.5
CTNNA1-216ENST00000519489 PAQR5Q9NXK6 330 aaPredicted RBP5.68□□□□□ -1.5
CTNNA1-216ENST00000519489 CTTNBP2NLQ9P2B4 639 aa5.68□□□□□ -1.5
CTNNA1-216ENST00000519489 TRMT6Q9UJA5 497 aaKnown RBP5.68□□□□□ -1.5
CTNNA1-216ENST00000519489 GPR55Q9Y2T6 319 aaPredicted RBP5.68□□□□□ -1.5
CTNNA1-216ENST00000519489 PLLPQ9Y342 182 aa5.68□□□□□ -1.5
CTNNA1-216ENST00000519489 LSM4Q9Y4Z0 139 aaKnown RBP5.68□□□□□ -1.5
CTNNA1-216ENST00000519489 PRAMEF27A3QJZ7 478 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 LGALS16A8MUM7 142 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 E5RI56 91 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 H3BMM5 538 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 TMPRSS11DO60235 418 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 TSPAN9O75954 239 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 ZFPL1O95159 310 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 GUCA1CO95843 209 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 ERCC1P07992 297 aaPredicted RBP5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 CELA3BP08861 270 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 CECR9P0C854 216 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 C1GALT1C1LP0DN25 315 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 CPMP14384 443 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 EVI2BP34910 448 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 SFTPDP35247 375 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 GDF5P43026 501 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 MAGEB1P43366 347 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 PPICP45877 212 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 POU3F1Q03052 451 aaPredicted RBP5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 KLHL30Q0D2K2 578 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 BIKQ13323 160 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 HIKESHIQ53FT3 197 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 C6orf163Q5TEZ5 329 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 LRRC38Q5VT99 294 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 ANKRD16Q6P6B7 361 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 Q6ZTK2 550 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 BBS12Q6ZW61 710 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 LARP4Q71RC2 724 aaKnown RBP eCLIP5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 THAP5Q7Z6K1 395 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 TMEM86BQ8N661 226 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 TRIM58Q8NG06 486 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 OR7G1Q8NGA0 311 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 UHMK1Q8TAS1 419 aaKnown RBP5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 DACT3Q96B18 629 aaPredicted RBP5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 R3HDM4Q96D70 268 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 RAB39BQ96DA2 213 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 SIGLEC10Q96LC7 697 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 KLHL15Q96M94 604 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 RCHY1Q96PM5 261 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 KCNC2Q96PR1 638 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 SLC38A2Q96QD8 506 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 PELOQ9BRX2 385 aaKnown RBP5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 ZNF717Q9BY31 904 aaPredicted RBP5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 ZNF442Q9H7R0 627 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 MAT2BQ9NZL9 334 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 REV1Q9UBZ9 1251 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 EFR3BQ9Y2G0 817 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 ASB4Q9Y574 426 aa5.67□□□□□ -1.5
CTNNA1-216ENST00000519489 IGLV3-32A0A0A0MS00 114 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 TRAV40A0A0B4J280 105 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 SDR42E2A6NKP2 422 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 APOC4-APOC2K7ER74 178 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 ANGPTL7O43827 346 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 VAPBO95292 243 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 APOC2P02655 101 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 GSNP06396 782 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 PABPC4LP0CB38 370 aaKnown RBP5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 CD1DP15813 335 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 RPL15P61313 204 aaKnown RBP5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 TUBA1BP68363 451 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 TUBA4AP68366 448 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 PAX2Q02962 417 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 CSTF3Q12996 717 aaKnown RBP5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 SP140Q13342 867 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 MLANAQ16655 118 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 PRICKLE4Q2TBC4 344 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 TRMT12Q53H54 448 aaKnown RBP5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 FAM205BPQ63HN1 556 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 MRM1Q6IN84 353 aaKnown RBP5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 GALNT18Q6P9A2 607 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 LHFPL2Q6ZUX7 228 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 TUBA1AQ71U36 451 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 GPR180Q86V85 440 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 CNTN4Q8IWV2 1026 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 ZNF100Q8IYN0 542 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 MLKLQ8NB16 471 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 Q8NFD4 153 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 NUP37Q8NFH4 326 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 RAB8BQ92930 207 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 UPRTQ96BW1 309 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 MFSD3Q96ES6 412 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 TMEM79Q9BSE2 394 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 KATNB1Q9BVA0 655 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 ZNF416Q9BWM5 594 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 MS4A8Q9BY19 250 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 NT5DC2Q9H857 520 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 SLC7A10Q9NS82 523 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 POLR3KQ9Y2Y1 108 aaPredicted RBP5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 CAPN6Q9Y6Q1 641 aa5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 APOBP04114 4563 aaKnown RBP5.66□□□□□ -1.5
CTNNA1-216ENST00000519489 MYCBP2O75592 4640 aa5.65□□□□□ -1.5
CTNNA1-216ENST00000519489 DMBT1Q9UGM3 2413 aaPredicted RBP5.65□□□□□ -1.5
CTNNA1-216ENST00000519489 HMCN2Q8NDA2 5059 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms