RNA–Protein interactions for RNA: ENST00000516419.1

SNORA48.9-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 162 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.9-201ENST00000516419 KRT13P13646 458 aa4.39□□□□□ -1.71
SNORA48.9-201ENST00000516419 GABRR1P24046 479 aa4.39□□□□□ -1.71
SNORA48.9-201ENST00000516419 WNT4P56705 351 aa4.39□□□□□ -1.71
SNORA48.9-201ENST00000516419 ORC2Q13416 577 aaPredicted RBP4.39□□□□□ -1.71
SNORA48.9-201ENST00000516419 TPD52L1Q16890 204 aaPredicted RBP4.39□□□□□ -1.71
SNORA48.9-201ENST00000516419 CCDC14Q49A88 953 aa4.39□□□□□ -1.71
SNORA48.9-201ENST00000516419 LCE3EQ5T5B0 92 aa4.39□□□□□ -1.71
SNORA48.9-201ENST00000516419 WDR74Q6RFH5 385 aaPredicted RBP4.39□□□□□ -1.71
SNORA48.9-201ENST00000516419 C12orf66Q96MD2 445 aa4.39□□□□□ -1.71
SNORA48.9-201ENST00000516419 TXN2Q99757 166 aa4.39□□□□□ -1.71
SNORA48.9-201ENST00000516419 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.39□□□□□ -1.71
SNORA48.9-201ENST00000516419 CD274Q9NZQ7 290 aa4.39□□□□□ -1.71
SNORA48.9-201ENST00000516419 UBQLN1Q9UMX0 589 aaKnown RBP4.39□□□□□ -1.71
SNORA48.9-201ENST00000516419 MAD1L1Q9Y6D9 718 aa4.39□□□□□ -1.71
SNORA48.9-201ENST00000516419 COL16A1Q07092 1604 aaPredicted RBP4.39□□□□□ -1.71
SNORA48.9-201ENST00000516419 A8MUI8 341 aa4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 NOL3O60936 208 aaKnown RBP4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 NEBLO76041 1014 aa4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 LALBAP00709 142 aa4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 TIMP1P01033 207 aa4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 PCCBP05166 539 aa4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 H2BFMP0C1H6 154 aa4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 CYP2B6P20813 491 aa4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 HOXD10P28358 340 aa4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 AP3M2P53677 418 aa4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 PJVKQ0ZLH3 352 aa4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 USH1GQ495M9 461 aa4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 C2orf83Q53S99 150 aa4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 ATF7IP2Q5U623 682 aa4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 KIAA1328Q86T90 577 aa4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 NRMQ8IXM6 262 aa4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 MTURNQ8N3F0 131 aa4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 CLDN19Q8N6F1 224 aa4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 ALLCQ8N6M5 410 aa4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 OR10A7Q8NGE5 316 aa4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 RNF126Q9BV68 326 aa4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 NAT10Q9H0A0 1025 aaKnown RBP4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 GLIPR2Q9H4G4 154 aa4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 RIBC2Q9H4K1 309 aa4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 MEAF6Q9HAF1 191 aa4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 SCML2Q9UQR0 700 aa4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 OR10H1Q9Y4A9 318 aa4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 PRRC2AP48634 2157 aaKnown RBP4.38□□□□□ -1.71
SNORA48.9-201ENST00000516419 NPIPA7E9PJI5 369 aa4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 K7N7A8 449 aa4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 HCN1O60741 890 aa4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 PEX11AO75192 247 aa4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 MMP23AO75900 390 aa4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 IGHV3-48P01763 117 aa4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 PTMAP06454 111 aaKnown RBP4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 NPIPA8P0DM63 369 aa4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 RNH1P13489 461 aaKnown RBP4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 DESP17661 470 aa4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 AQP1P29972 269 aa4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 HPCAL1P37235 193 aa4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 PLK1P53350 603 aa4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 GNB2P62879 340 aa4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 CHRNB3Q05901 458 aa4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 SLC36A3Q495N2 470 aa4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 FAM71F2Q6NXP2 309 aa4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 ACOT1Q86TX2 421 aa4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 LRRC43Q8N309 656 aa4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 OR2AP1Q8NGE2 309 aa4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 OSTF1Q92882 214 aa4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 PLEKHF1Q96S99 279 aa4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 TMEM117Q9H0C3 514 aa4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 WARS2Q9UGM6 360 aaKnown RBP4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 NPIPA1Q9UND3 350 aa4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 AP1M2Q9Y6Q5 423 aa4.37□□□□□ -1.71
SNORA48.9-201ENST00000516419 ZNF264O43296 627 aa4.36□□□□□ -1.71
SNORA48.9-201ENST00000516419 BCAS1O75363 584 aaPredicted RBP4.36□□□□□ -1.71
SNORA48.9-201ENST00000516419 BBOX1O75936 387 aa4.36□□□□□ -1.71
SNORA48.9-201ENST00000516419 TM7SF2O76062 418 aa4.36□□□□□ -1.71
SNORA48.9-201ENST00000516419 CA1P00915 261 aaPredicted RBP4.36□□□□□ -1.71
SNORA48.9-201ENST00000516419 TSPY4P0CV99 314 aa4.36□□□□□ -1.71
SNORA48.9-201ENST00000516419 TSPY10P0CW01 314 aa4.36□□□□□ -1.71
SNORA48.9-201ENST00000516419 DRD5P21918 477 aa4.36□□□□□ -1.71
SNORA48.9-201ENST00000516419 CNTN2Q02246 1040 aa4.36□□□□□ -1.71
SNORA48.9-201ENST00000516419 IL17AQ16552 155 aa4.36□□□□□ -1.71
SNORA48.9-201ENST00000516419 TPRA1Q86W33 373 aa4.36□□□□□ -1.71
SNORA48.9-201ENST00000516419 TMEM252Q8N6L7 170 aa4.36□□□□□ -1.71
SNORA48.9-201ENST00000516419 OR51G2Q8NGK0 314 aa4.36□□□□□ -1.71
SNORA48.9-201ENST00000516419 DTNBP1Q96EV8 351 aa4.36□□□□□ -1.71
SNORA48.9-201ENST00000516419 RIT2Q99578 217 aa4.36□□□□□ -1.71
SNORA48.9-201ENST00000516419 SMYD3Q9H7B4 428 aa4.36□□□□□ -1.71
SNORA48.9-201ENST00000516419 TMOD2Q9NZR1 351 aa4.36□□□□□ -1.71
SNORA48.9-201ENST00000516419 ANGPT2O15123 496 aa4.35□□□□□ -1.71
SNORA48.9-201ENST00000516419 SLITRK3O94933 977 aa4.35□□□□□ -1.71
SNORA48.9-201ENST00000516419 GNA14O95837 355 aa4.35□□□□□ -1.71
SNORA48.9-201ENST00000516419 HSPA5P11021 654 aaKnown RBP4.35□□□□□ -1.71
SNORA48.9-201ENST00000516419 HPDP32754 393 aaPredicted RBP4.35□□□□□ -1.71
SNORA48.9-201ENST00000516419 CA8P35219 290 aa4.35□□□□□ -1.71
SNORA48.9-201ENST00000516419 HNRNPA3P51991 378 aaKnown RBP4.35□□□□□ -1.71
SNORA48.9-201ENST00000516419 CUL1Q13616 776 aa4.35□□□□□ -1.71
SNORA48.9-201ENST00000516419 MXD4Q14582 209 aaPredicted RBP4.35□□□□□ -1.71
SNORA48.9-201ENST00000516419 HERPUD1Q15011 391 aa4.35□□□□□ -1.71
SNORA48.9-201ENST00000516419 SYPL1Q16563 259 aa4.35□□□□□ -1.71
SNORA48.9-201ENST00000516419 ARCQ7LC44 396 aa4.35□□□□□ -1.71
SNORA48.9-201ENST00000516419 KRTAP11-1Q8IUC1 163 aa4.35□□□□□ -1.71
SNORA48.9-201ENST00000516419 SVOPLQ8N434 492 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms