RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 TRIB1Q96RU8 372 aa6.46□□□□□ -1.38
PDLIM5-215ENST00000511586 CGREF1Q99674 301 aa6.46□□□□□ -1.38
PDLIM5-215ENST00000511586 SH3GL1Q99961 368 aa6.46□□□□□ -1.38
PDLIM5-215ENST00000511586 TREX2Q9BQ50 279 aaPredicted RBP6.46□□□□□ -1.38
PDLIM5-215ENST00000511586 KLHDC3Q9BQ90 382 aa6.46□□□□□ -1.38
PDLIM5-215ENST00000511586 TUBA1CQ9BQE3 449 aa6.46□□□□□ -1.38
PDLIM5-215ENST00000511586 THUMPD3Q9BV44 507 aaKnown RBP6.46□□□□□ -1.38
PDLIM5-215ENST00000511586 ARMC7Q9H6L4 198 aa6.46□□□□□ -1.38
PDLIM5-215ENST00000511586 BCL2L10Q9HD36 194 aa6.46□□□□□ -1.38
PDLIM5-215ENST00000511586 EXOSC3Q9NQT5 275 aaKnown RBP6.46□□□□□ -1.38
PDLIM5-215ENST00000511586 GID8Q9NWU2 228 aa6.46□□□□□ -1.38
PDLIM5-215ENST00000511586 PLEKHB1Q9UF11 243 aaPredicted RBP6.46□□□□□ -1.38
PDLIM5-215ENST00000511586 IFT52Q9Y366 437 aa6.46□□□□□ -1.38
PDLIM5-215ENST00000511586 GPC6Q9Y625 555 aaPredicted RBP6.46□□□□□ -1.38
PDLIM5-215ENST00000511586 DNAJC13O75165 2243 aa6.46□□□□□ -1.38
PDLIM5-215ENST00000511586 DSPPQ9NZW4 1301 aa6.46□□□□□ -1.38
PDLIM5-215ENST00000511586 BAHCC1Q9P281 2608 aa6.46□□□□□ -1.38
PDLIM5-215ENST00000511586 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 MBD3L4A6NDZ8 208 aaPredicted RBP6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 MBD3L3A6NE82 208 aaPredicted RBP6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 MBD3L5A6NJ08 208 aaPredicted RBP6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 CLDN24A6NM45 220 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 HSPB2A8KAH6 182 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 SHISA8B8ZZ34 492 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 MRASO14807 208 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 GYG2O15488 501 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 SEC14L5O43304 696 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 BCAS1O75363 584 aaPredicted RBP6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 PGM3O95394 542 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 CLDN14O95500 239 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 CLDN1O95832 211 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 IL2RAP01589 272 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 THBS1P07996 1170 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 ARAFP10398 606 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 ETS2P15036 469 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 PRKCAP17252 672 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 SLC6A2P23975 617 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 PSMA4P25789 261 aaKnown RBP6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 ELK4P28324 431 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 CPA2P48052 419 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 CLDN20P56880 219 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 MTPNP58546 118 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 RPS3AP61247 264 aaKnown RBP6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 RAC1P63000 192 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 RBBP4Q09028 425 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 FOXF1Q12946 379 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 CAPRIN1Q14444 709 aaKnown RBP6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 QPRTQ15274 297 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 TOMM34Q15785 309 aaPredicted RBP6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 HSPB2Q16082 182 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 CYP51A1Q16850 503 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 ZSWIM7Q19AV6 140 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 TRMT5Q32P41 509 aaKnown RBP6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 DNAL1Q4LDG9 190 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 LIN52Q52LA3 116 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 SLC25A53Q5H9E4 307 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 RPS26P11Q5JNZ5 115 aaPredicted RBP6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 MRPL2Q5T653 305 aaKnown RBP6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 REP15Q6BDI9 236 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 NANOGP8Q6NSW7 305 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 REEP3Q6NUK4 255 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 MYO7BQ6PIF6 2116 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 SEM1Q6ZVN7 128 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 ASRGL1Q7L266 308 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 ADGRE4PQ86SQ3 457 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 VRK2Q86Y07 508 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 KRT73Q86Y46 540 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 TREML1Q86YW5 311 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 ZNF440Q8IYI8 595 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 LILRA2Q8N149 483 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 FAM71CQ8NEG0 241 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 OR52P1PQ8NH57 321 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 LILRB4Q8NHJ6 448 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 MBD3L2Q8NHZ7 208 aaPredicted RBP6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 FBXO27Q8NI29 283 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 NFKBIDQ8NI38 313 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 RP9Q8TA86 221 aaKnown RBP6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 ZNF563Q8TA94 476 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 BBS10Q8TAM1 723 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 POC1BQ8TC44 478 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 WDR60Q8WVS4 1066 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 ST8SIA1Q92185 356 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 SMPDL3BQ92485 455 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 CNOT9Q92600 299 aaKnown RBP6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 WNT2BQ93097 391 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 LRRC58Q96CX6 371 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 CMTM5Q96DZ9 223 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 MRGPRX4Q96LA9 322 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 UCN2Q96RP3 112 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 NPAS1Q99742 590 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 TM9SF2Q99805 663 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 CCDC106Q9BWC9 280 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 IKZF5Q9H5V7 419 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 TMEM38AQ9H6F2 299 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 NANOGQ9H9S0 305 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 SERINC1Q9NRX5 453 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 ACER3Q9NUN7 267 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 PRDM4Q9UKN5 801 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 RNF6Q9Y252 685 aa6.45□□□□□ -1.38
PDLIM5-215ENST00000511586 KLF2Q9Y5W3 355 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms