RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 CCNB1IP1Q9NPC3 277 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 DUS2Q9NX74 493 aaKnown RBP5.31□□□□□ -1.56
BRCA1-224ENST00000497488 SIGLEC8Q9NYZ4 499 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 SMARCAL1Q9NZC9 954 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 PEX16Q9Y5Y5 336 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 TNS1Q9HBL0 1735 aaKnown RBP5.31□□□□□ -1.56
BRCA1-224ENST00000497488 SNED1Q8TER0 1413 aa5.31□□□□□ -1.56
BRCA1-224ENST00000497488 RTL1A6NKG5 1358 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 MROH7-TTC4A0A0A0MT08 1334 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 MEGF6O75095 1541 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 A0A1B0GVT2 93 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 A0A1W2PPV9 198 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 LINC01553A4QN01 128 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 LRIT2A6NDA9 550 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 NKX6-3A6NJ46 265 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 PDZK1P1A8MUH7 402 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 RSPH10B2B2RC85 870 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 ZNF587BE7ETH6 402 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 ADAM10O14672 748 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 EPHB6O15197 1021 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 MSH4O15457 936 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 HCN1O60741 890 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 RAMP3O60896 148 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 LRCH4O75427 683 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 CDK2AP2O75956 126 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 F10P00742 488 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 CA1P00915 261 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-224ENST00000497488 SERPINE2P07093 398 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 RSPH10BP0C881 870 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 IMPDH1P20839 514 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 GTF2E2P29084 291 aaKnown RBP5.3□□□□□ -1.56
BRCA1-224ENST00000497488 YWHABP31946 246 aaKnown RBP5.3□□□□□ -1.56
BRCA1-224ENST00000497488 FEN1P39748 380 aaKnown RBP5.3□□□□□ -1.56
BRCA1-224ENST00000497488 UQCRFS1P47985 274 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 UBE2IP63279 158 aaKnown RBP5.3□□□□□ -1.56
BRCA1-224ENST00000497488 CDK16Q00536 496 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 CDH17Q12864 832 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 KLRB1Q12918 225 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 FOXF2Q12947 444 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 SLC15A2Q16348 729 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 MTX3Q5HYI7 312 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 SLC22A10Q63ZE4 541 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 ACSM5Q6NUN0 579 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 BTNL3Q6UXE8 466 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 HACD2Q6Y1H2 254 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 ZNF730Q6ZMV8 503 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 Q6ZVQ6 151 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 NDUFAF7Q7L592 441 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 PTF1AQ7RTS3 328 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 CCDC50Q8IVM0 306 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 GVQW1Q8N7I0 195 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 GATSQ8NAP1 163 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 SMRP1Q8NCR6 262 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 OR4F17Q8NGA8 305 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 OR10A7Q8NGE5 316 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 OR9G4Q8NGQ1 327 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 OR4F5Q8NH21 305 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 TIMD4Q96H15 378 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 OR4F4Q96R69 305 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 MBOAT4Q96T53 435 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 LPAR4Q99677 370 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 P2RY13Q9BPV8 354 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 NXF5Q9H1B4 397 aaKnown RBP5.3□□□□□ -1.56
BRCA1-224ENST00000497488 IKZF5Q9H5V7 419 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 C3orf14Q9HBI5 128 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 MRPL47Q9HD33 250 aaKnown RBP5.3□□□□□ -1.56
BRCA1-224ENST00000497488 NRN1Q9NPD7 142 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 DCAF13Q9NV06 445 aaKnown RBP5.3□□□□□ -1.56
BRCA1-224ENST00000497488 ZNF221Q9UK13 617 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 ANKRD26Q9UPS8 1709 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 TNS2Q63HR2 1409 aa5.3□□□□□ -1.56
BRCA1-224ENST00000497488 RGPD2P0DJD1 1756 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 NEDD4P46934 1319 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 CGNL1Q0VF96 1302 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 FRMPD4Q14CM0 1322 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 A0A0J9YVX5 310 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 SMIM35A0A1B0GVV1 85 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 GSTTP1A0A1W2PQM5 241 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 MEX3AA1L020 520 aaKnown RBP5.29□□□□□ -1.56
BRCA1-224ENST00000497488 G3V4G9 280 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 KHDRBS3O75525 346 aaKnown RBP5.29□□□□□ -1.56
BRCA1-224ENST00000497488 CDK14O94921 469 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 DIRAS1O95057 198 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 LATS1O95835 1130 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 IGSF6O95976 241 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 IGHG3P01860 377 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 SP1P08047 785 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 HOXC6P09630 235 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 H2AFXP16104 143 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-224ENST00000497488 KITLGP21583 273 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 CCNOP22674 350 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 AADACP22760 399 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 HMOX2P30519 316 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 IST1P53990 364 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 TNNC1P63316 161 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 SRSF1Q07955 248 aaKnown RBP eCLIP5.29□□□□□ -1.56
BRCA1-224ENST00000497488 RIGQ13278 110 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 DAZAP2Q15038 168 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-224ENST00000497488 PPP1R3AQ16821 1122 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 TP53I3Q53FA7 332 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms