RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 ATP6V1FQ16864 119 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 MICAQ29983 383 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF569Q5MCW4 686 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 LGSNQ5TDP6 509 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 BAIAP2L2Q6UXY1 529 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 DLEU7Q6UYE1 221 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 SH2D5Q6ZV89 423 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 GPRIN1Q7Z2K8 1008 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 TMEM144Q7Z5S9 345 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 MRPL52Q86TS9 123 aaKnown RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC26A11Q86WA9 606 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 LMNTD1Q8N9Z9 388 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 FAM98AQ8NCA5 519 aaKnown RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 TMEM161BQ8NDZ6 487 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 PXT1Q8NFP0 134 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 OR2M7Q8NG81 312 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 OR51D1Q8NGF3 324 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 OR52B4Q8NGK2 314 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ZCCHC10Q8TBK6 192 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 PIH1D2Q8WWB5 315 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 TMEM45BQ96B21 275 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ULK4Q96C45 1275 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 FAF2Q96CS3 445 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 CPB2Q96IY4 423 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 HARBI1Q96MB7 349 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 DUX5Q96PT3 197 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ALKBH3Q96Q83 286 aaPredicted RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 OSBPL11Q9BXB4 747 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ELOVL6Q9H5J4 265 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 EPHX3Q9H6B9 360 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 WDR54Q9H977 334 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ADARB2Q9NS39 739 aaKnown RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 TMLHEQ9NVH6 421 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 MRPS18AQ9NVS2 196 aaKnown RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 BEX4Q9NWD9 120 aaPredicted RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ALKBH4Q9NXW9 302 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 RHCGQ9UBD6 479 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 MRM2Q9UI43 246 aaKnown RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 MRTO4Q9UKD2 239 aaKnown RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 PADI3Q9ULW8 664 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 SNX12Q9UMY4 172 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 MRPS33Q9Y291 106 aaKnown RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 USP42Q9H9J4 1324 aaKnown RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 NCAPD2Q15021 1401 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 TRAPPC8Q9Y2L5 1435 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 FANCAO15360 1455 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 MLH3Q9UHC1 1453 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 UNC13BO14795 1591 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 NEURL4Q96JN8 1562 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 INO80Q9ULG1 1556 aaPredicted RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 SETBP1Q9Y6X0 1596 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 RNF17Q9BXT8 1623 aaKnown RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 A0A087X1B8 175 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 C5orf52A6NGY3 159 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 NKX6-3A6NJ46 265 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 VSTM2BA6NLU5 285 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 DISC1C4P0D8 188 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC28A1O00337 649 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 TP53I11O14683 189 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF749O43361 778 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 TGOLN2O43493 480 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 KHDRBS3O75525 346 aaKnown RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 UGT2B17O75795 530 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 WDR47O94967 919 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 CXCL14O95715 111 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 BCL10O95999 233 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 MT-CYBP00156 380 aaPredicted RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ALDOAP04075 364 aaKnown RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 SHBGP04278 402 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 RHOP08100 348 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 SNHG28P0DPA3 235 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 GTF2F2P13984 249 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 PAX1P15863 534 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 RAB3BP20337 219 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ZFP36P26651 326 aaKnown RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 GNRHRP30968 328 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 CDKN1AP38936 164 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 MPLP40238 635 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 MAGEA12P43365 314 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 MRPL19P49406 292 aaKnown RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 RGS4P49798 205 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 KLF3P57682 345 aaPredicted RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ZP1P60852 638 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 RAB5BP61020 215 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 SSBP2P81877 361 aaPredicted RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 GNA12Q03113 381 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 PMPCAQ10713 525 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ECH1Q13011 328 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC29A2Q14542 456 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 EXT1Q16394 746 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 TRMT5Q32P41 509 aaKnown RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 Q5BKY6 102 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 SIRPB2Q5JXA9 342 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 N4BP2L1Q5TBK1 243 aaPredicted RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ATRAIDQ6UW56 229 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 RBMS3Q6XE24 437 aaKnown RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ABHD13Q7L211 337 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF627Q7L945 461 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 FAM220AQ7Z4H9 259 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ABI3BPQ7Z7G0 1075 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms