RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 CDHR4A6H8M9 788 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 H0YC42 278 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 ETV2O00321 342 aaPredicted RBP12.22□□□□□ -0.45
COL1A1-208ENST00000494334 EFNA2O43921 213 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 NTN1O95631 604 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 EPPINO95925 133 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 THBS1P07996 1170 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 GLI4P10075 376 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 PGCP20142 388 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 POU3F2P20265 443 aaPredicted RBP12.22□□□□□ -0.45
COL1A1-208ENST00000494334 IL11P20809 199 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 ADH6P28332 368 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 PRDX6P30041 224 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 RYKP34925 604 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 EIF1P41567 113 aaKnown RBP12.22□□□□□ -0.45
COL1A1-208ENST00000494334 TPD52P55327 224 aaPredicted RBP12.22□□□□□ -0.45
COL1A1-208ENST00000494334 CLDN20P56880 219 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 NUP107P57740 925 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 LARS2Q15031 903 aaKnown RBP12.22□□□□□ -0.45
COL1A1-208ENST00000494334 ACSF3Q4G176 576 aaPredicted RBP12.22□□□□□ -0.45
COL1A1-208ENST00000494334 SLC25A53Q5H9E4 307 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 ZNF311Q5JNZ3 666 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 GKAP1Q5VSY0 366 aaPredicted RBP12.22□□□□□ -0.45
COL1A1-208ENST00000494334 RNF220Q5VTB9 566 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 RPTNQ6XPR3 784 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 SEM1Q6ZVN7 128 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 ZZZ3Q8IYH5 903 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 UBQLNLQ8IYU4 475 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 CLIP4Q8N3C7 705 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 C11orf65Q8NCR3 313 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 ITLN2Q8WWU7 325 aaPredicted RBP12.22□□□□□ -0.45
COL1A1-208ENST00000494334 LRRC37BQ96QE4 947 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 ECSITQ9BQ95 431 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 TUBA1CQ9BQE3 449 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 GPATCH1Q9BRR8 931 aaKnown RBP12.22□□□□□ -0.45
COL1A1-208ENST00000494334 SPATA9Q9BWV2 254 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 PIF1Q9H611 641 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 EFCAB1Q9HAE3 211 aa12.22□□□□□ -0.45
COL1A1-208ENST00000494334 H0Y3Z8 333 aa12.21□□□□□ -0.45
COL1A1-208ENST00000494334 GCM2O75603 506 aaPredicted RBP12.21□□□□□ -0.45
COL1A1-208ENST00000494334 DCTN3O75935 186 aa12.21□□□□□ -0.45
COL1A1-208ENST00000494334 OPN1LWP04000 364 aa12.21□□□□□ -0.45
COL1A1-208ENST00000494334 AQP1P29972 269 aa12.21□□□□□ -0.45
COL1A1-208ENST00000494334 SLC6A8P48029 635 aa12.21□□□□□ -0.45
COL1A1-208ENST00000494334 PCBP3P57721 371 aaKnown RBP12.21□□□□□ -0.45
COL1A1-208ENST00000494334 SESN3P58005 492 aa12.21□□□□□ -0.45
COL1A1-208ENST00000494334 RAC1P63000 192 aa12.21□□□□□ -0.45
COL1A1-208ENST00000494334 SF3B4Q15427 424 aaKnown RBP eCLIP12.21□□□□□ -0.45
COL1A1-208ENST00000494334 VMACQ2NL98 169 aa12.21□□□□□ -0.45
COL1A1-208ENST00000494334 NSUN5P2Q63ZY6 315 aa12.21□□□□□ -0.45
COL1A1-208ENST00000494334 C8orf82Q6P1X6 216 aaPredicted RBP12.21□□□□□ -0.45
COL1A1-208ENST00000494334 MRGPRGQ86SM5 289 aa12.21□□□□□ -0.45
COL1A1-208ENST00000494334 ADGRE4PQ86SQ3 457 aa12.21□□□□□ -0.45
COL1A1-208ENST00000494334 CALHM3Q86XJ0 350 aa12.21□□□□□ -0.45
COL1A1-208ENST00000494334 GRAMD2AQ8IUY3 354 aa12.21□□□□□ -0.45
COL1A1-208ENST00000494334 MEIOBQ8N635 442 aa12.21□□□□□ -0.45
COL1A1-208ENST00000494334 ZNF563Q8TA94 476 aa12.21□□□□□ -0.45
COL1A1-208ENST00000494334 SMPDL3BQ92485 455 aa12.21□□□□□ -0.45
COL1A1-208ENST00000494334 RND1Q92730 232 aa12.21□□□□□ -0.45
COL1A1-208ENST00000494334 MRGPRX4Q96LA9 322 aa12.21□□□□□ -0.45
COL1A1-208ENST00000494334 ZNF583Q96ND8 569 aa12.21□□□□□ -0.45
COL1A1-208ENST00000494334 TRIB1Q96RU8 372 aa12.21□□□□□ -0.45
COL1A1-208ENST00000494334 CACYBPQ9HB71 228 aaKnown RBP12.21□□□□□ -0.45
COL1A1-208ENST00000494334 CMTM6Q9NX76 183 aa12.21□□□□□ -0.45
COL1A1-208ENST00000494334 ANGPT4Q9Y264 503 aa12.21□□□□□ -0.45
COL1A1-208ENST00000494334 CFAP73A6NFT4 308 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 CD8B2A6NJW9 211 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 CLCA1A8K7I4 914 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 M0QX08 132 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 AP3D1O14617 1153 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 SEC14L5O43304 696 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 TOXO94900 526 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 GKN3PP0CG01 181 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 ELK4P28324 431 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 PRKAR1BP31321 381 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 ACAA2P42765 397 aaKnown RBP12.2□□□□□ -0.46
COL1A1-208ENST00000494334 IDH2P48735 452 aaKnown RBP12.2□□□□□ -0.46
COL1A1-208ENST00000494334 NUDT2P50583 147 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 SMSP52788 366 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 DLX5P56178 289 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 EPS8Q12929 822 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 ART3Q13508 389 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 ZSWIM7Q19AV6 140 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 FAM91A1Q658Y4 838 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 PLXDC2Q6UX71 529 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 HACD2Q6Y1H2 254 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 GGNQ86UU5 652 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 KRT73Q86Y46 540 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 SLC15A3Q8IY34 581 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 ZNF440Q8IYI8 595 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 ZNF808Q8N4W9 903 aaPredicted RBP12.2□□□□□ -0.46
COL1A1-208ENST00000494334 CCDC197Q8NCU1 140 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 TMEM234Q8WY98 164 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 ST8SIA1Q92185 356 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 ADGRG7Q96K78 797 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 PSMG3-AS1Q96PY0 264 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 UCN2Q96RP3 112 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 ZNF607Q96SK3 696 aa12.2□□□□□ -0.46
COL1A1-208ENST00000494334 HOPXQ9BPY8 73 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms