RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 OR1E2P47887 323 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 DNASE1L1P49184 302 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 RGS8P57771 180 aaPredicted RBP12.22□□□□□ -0.45
MSH6-208ENST00000493177 C17orf67Q0P5P2 114 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.22□□□□□ -0.45
MSH6-208ENST00000493177 FNDC7Q5VTL7 733 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 OR5M10Q6IEU7 315 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 TMEM81Q6P7N7 255 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 ZNF550Q7Z398 422 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 PACS2Q86VP3 889 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 SULF2Q8IWU5 870 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 C10orf67Q8IYJ2 551 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 GHDCQ8N2G8 530 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 OR4K17Q8NGC6 315 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 B4GALNT2Q8NHY0 566 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 ARHGDIGQ99819 225 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 LAT2Q9GZY6 243 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 HHATLQ9HCP6 504 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 DNAJB12Q9NXW2 375 aaKnown RBP12.22□□□□□ -0.45
MSH6-208ENST00000493177 CHST2Q9Y4C5 530 aa12.22□□□□□ -0.45
MSH6-208ENST00000493177 A0A0G2JMM0 328 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 A0A1W2PPB8 328 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 A0A1W2PRS3 328 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 ANKRD33BA6NCL7 494 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 KIR3DP1A8MWS1 328 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 TMEM229AB2RXF0 380 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 AP3D1O14617 1153 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 OIP5O43482 229 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 EIF4E2O60573 245 aaKnown RBP12.21□□□□□ -0.45
MSH6-208ENST00000493177 SLC19A2O60779 497 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 ZG16O60844 167 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 SNX4O95219 450 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 NUDT14O95848 222 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 EPPINO95925 133 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 IFNW1P05000 195 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 RYKP34925 604 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 ADH7P40394 386 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 GAS1P54826 345 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 HOXC5Q00444 222 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 ZNF117Q03924 483 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 NRF1Q16656 503 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 MTFR2Q6P444 385 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 DEF8Q6ZN54 512 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 COMTD1Q86VU5 262 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 RANBP3LQ86VV4 465 aaPredicted RBP12.21□□□□□ -0.45
MSH6-208ENST00000493177 LACC1Q8IV20 430 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 ZNF440Q8IYI8 595 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 ADGRG5Q8IZF4 528 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 RNF138Q8WVD3 245 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 CANT1Q8WVQ1 401 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 STMN2Q93045 179 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 ARSGQ96EG1 525 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 ZNF597Q96LX8 424 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 RSPO3Q9BXY4 272 aaPredicted RBP12.21□□□□□ -0.45
MSH6-208ENST00000493177 MAGIXQ9H6Y5 334 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 MED11Q9P086 117 aa12.21□□□□□ -0.45
MSH6-208ENST00000493177 FAM47E-STBD1D6RA91 191 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 hCG_2039718K7EN88 272 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 SNPHO15079 494 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 ENTPD5O75356 428 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 FABP3P05413 133 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 RAP2AP10114 183 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 UQCRBP14927 111 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 CA7P43166 264 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 SLC6A8P48029 635 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 P2RX1P51575 399 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 SKP2Q13309 424 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 HIST2H2BCQ6DN03 193 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 CBLN3Q6UW01 205 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 RBM45Q8IUH3 476 aaKnown RBP12.2□□□□□ -0.46
MSH6-208ENST00000493177 GRAMD2AQ8IUY3 354 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 TOR1AIP2Q8NFQ8 470 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 OR4D11Q8NGI4 311 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 OR6T1Q8NGN1 323 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 OR1J4Q8NGS1 313 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 ZNF563Q8TA94 476 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 PYDC1Q8WXC3 89 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 TMEM41AQ96HV5 264 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 FAM173AQ9BQD7 235 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 WFDC6Q9BQY6 131 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 DSN1Q9H410 356 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 EVA1AQ9H8M9 152 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 PROK2Q9HC23 129 aa12.2□□□□□ -0.46
MSH6-208ENST00000493177 EXOSC3Q9NQT5 275 aaKnown RBP12.2□□□□□ -0.46
MSH6-208ENST00000493177 TUBA8Q9NY65 449 aaPredicted RBP12.2□□□□□ -0.46
MSH6-208ENST00000493177 BOKQ9UMX3 212 aaPredicted RBP12.2□□□□□ -0.46
MSH6-208ENST00000493177 RRP15Q9Y3B9 282 aaKnown RBP12.2□□□□□ -0.46
MSH6-208ENST00000493177 FAM32AQ9Y421 112 aaKnown RBP12.2□□□□□ -0.46
MSH6-208ENST00000493177 RP1L1Q8IWN7 2480 aaPredicted RBP12.19□□□□□ -0.46
MSH6-208ENST00000493177 HIVEP3Q5T1R4 2406 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 PRRG2O14669 202 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 FKBP6O75344 327 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 MT-ND1P03886 318 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 LINGO3P0C6S8 592 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 PRG2P13727 222 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 PGCP20142 388 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 MSX1P28360 303 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 SLC7A1P30825 629 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 YAP1P46937 504 aaKnown RBP12.19□□□□□ -0.46
MSH6-208ENST00000493177 COPZ1P61923 177 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms