RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 FAM215AQ9Y5M1 114 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 CFAP73A6NFT4 308 aa12.61□□□□□ -0.39
CCM2-217ENST00000492883 SHOX2O60902 331 aaPredicted RBP12.61□□□□□ -0.39
CCM2-217ENST00000492883 EPPINO95925 133 aa12.61□□□□□ -0.39
CCM2-217ENST00000492883 OPN1LWP04000 364 aa12.61□□□□□ -0.39
CCM2-217ENST00000492883 PABPC4LP0CB38 370 aaKnown RBP12.61□□□□□ -0.39
CCM2-217ENST00000492883 RNF224P0DH78 156 aa12.61□□□□□ -0.39
CCM2-217ENST00000492883 GLI4P10075 376 aa12.61□□□□□ -0.39
CCM2-217ENST00000492883 UQCRBP14927 111 aa12.61□□□□□ -0.39
CCM2-217ENST00000492883 PRKCAP17252 672 aa12.61□□□□□ -0.39
CCM2-217ENST00000492883 ME2P23368 584 aa12.61□□□□□ -0.39
CCM2-217ENST00000492883 NUDT2P50583 147 aa12.61□□□□□ -0.39
CCM2-217ENST00000492883 SUCLG1P53597 346 aaKnown RBP12.61□□□□□ -0.39
CCM2-217ENST00000492883 NUP107P57740 925 aa12.61□□□□□ -0.39
CCM2-217ENST00000492883 SESN3P58005 492 aa12.61□□□□□ -0.39
CCM2-217ENST00000492883 EEF1A1P68104 462 aaKnown RBP12.61□□□□□ -0.39
CCM2-217ENST00000492883 ADORA2A-AS1P86434 159 aa12.61□□□□□ -0.39
CCM2-217ENST00000492883 ACSF3Q4G176 576 aaPredicted RBP12.61□□□□□ -0.39
CCM2-217ENST00000492883 XKRXQ6PP77 449 aa12.61□□□□□ -0.39
CCM2-217ENST00000492883 NET1Q7Z628 596 aaPredicted RBP12.61□□□□□ -0.39
CCM2-217ENST00000492883 PTOV1Q86YD1 416 aa12.61□□□□□ -0.39
CCM2-217ENST00000492883 SLC30A8Q8IWU4 369 aa12.61□□□□□ -0.39
CCM2-217ENST00000492883 ZZZ3Q8IYH5 903 aa12.61□□□□□ -0.39
CCM2-217ENST00000492883 ZNF440Q8IYI8 595 aa12.61□□□□□ -0.39
CCM2-217ENST00000492883 MARVELD2Q8N4S9 558 aa12.61□□□□□ -0.39
CCM2-217ENST00000492883 ANKS4BQ8N8V4 417 aa12.61□□□□□ -0.39
CCM2-217ENST00000492883 HOPXQ9BPY8 73 aaPredicted RBP12.61□□□□□ -0.39
CCM2-217ENST00000492883 TUBA1CQ9BQE3 449 aa12.61□□□□□ -0.39
CCM2-217ENST00000492883 SPATA9Q9BWV2 254 aa12.61□□□□□ -0.39
CCM2-217ENST00000492883 TMEM185BQ9H7F4 350 aa12.61□□□□□ -0.39
CCM2-217ENST00000492883 DNAJB12Q9NXW2 375 aaKnown RBP12.61□□□□□ -0.39
CCM2-217ENST00000492883 CDHR4A6H8M9 788 aa12.6□□□□□ -0.39
CCM2-217ENST00000492883 PRORSD1PA6NEY8 169 aa12.6□□□□□ -0.39
CCM2-217ENST00000492883 H0YC42 278 aa12.6□□□□□ -0.39
CCM2-217ENST00000492883 EIF1AYO14602 144 aaKnown RBP12.6□□□□□ -0.39
CCM2-217ENST00000492883 DNAJA2O60884 412 aa12.6□□□□□ -0.39
CCM2-217ENST00000492883 GKN3PP0CG01 181 aa12.6□□□□□ -0.39
CCM2-217ENST00000492883 GP1BBP13224 206 aa12.6□□□□□ -0.39
CCM2-217ENST00000492883 PSMA4P25789 261 aaKnown RBP12.6□□□□□ -0.39
CCM2-217ENST00000492883 IDH2P48735 452 aaKnown RBP12.6□□□□□ -0.39
CCM2-217ENST00000492883 TPD52P55327 224 aaPredicted RBP12.6□□□□□ -0.39
CCM2-217ENST00000492883 CLDN20P56880 219 aa12.6□□□□□ -0.39
CCM2-217ENST00000492883 RPS3AP61247 264 aaKnown RBP12.6□□□□□ -0.39
CCM2-217ENST00000492883 RAC1P63000 192 aa12.6□□□□□ -0.39
CCM2-217ENST00000492883 SGCBQ16585 318 aa12.6□□□□□ -0.39
CCM2-217ENST00000492883 VMACQ2NL98 169 aa12.6□□□□□ -0.39
CCM2-217ENST00000492883 INTS11Q5TA45 600 aaKnown RBP12.6□□□□□ -0.39
CCM2-217ENST00000492883 RNF220Q5VTB9 566 aa12.6□□□□□ -0.39
CCM2-217ENST00000492883 NSUN5P2Q63ZY6 315 aa12.6□□□□□ -0.39
CCM2-217ENST00000492883 ZNF550Q7Z398 422 aa12.6□□□□□ -0.39
CCM2-217ENST00000492883 ARPINQ7Z6K5 226 aa12.6□□□□□ -0.39
CCM2-217ENST00000492883 LACC1Q8IV20 430 aa12.6□□□□□ -0.39
CCM2-217ENST00000492883 LILRA2Q8N149 483 aa12.6□□□□□ -0.39
CCM2-217ENST00000492883 CLIP4Q8N3C7 705 aa12.6□□□□□ -0.39
CCM2-217ENST00000492883 ZNF808Q8N4W9 903 aaPredicted RBP12.6□□□□□ -0.39
CCM2-217ENST00000492883 ATP6V1C2Q8NEY4 427 aa12.6□□□□□ -0.39
CCM2-217ENST00000492883 ITLN2Q8WWU7 325 aaPredicted RBP12.6□□□□□ -0.39
CCM2-217ENST00000492883 ST8SIA1Q92185 356 aa12.6□□□□□ -0.39
CCM2-217ENST00000492883 SDCCAG3Q96C92 435 aa12.6□□□□□ -0.39
CCM2-217ENST00000492883 CALHM2Q9HA72 323 aa12.6□□□□□ -0.39
CCM2-217ENST00000492883 SERINC1Q9NRX5 453 aa12.6□□□□□ -0.39
CCM2-217ENST00000492883 ACER3Q9NUN7 267 aa12.6□□□□□ -0.39
CCM2-217ENST00000492883 SLC13A4Q9UKG4 626 aa12.6□□□□□ -0.39
CCM2-217ENST00000492883 AP3M1Q9Y2T2 418 aa12.6□□□□□ -0.39
CCM2-217ENST00000492883 SPENQ96T58 3664 aaKnown RBP12.59□□□□□ -0.39
CCM2-217ENST00000492883 CD8B2A6NJW9 211 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 GJE1A6NN92 205 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 CLCA1A8K7I4 914 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 M0QX08 132 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 NDUFAB1O14561 156 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 AP3D1O14617 1153 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 IL2RAP01589 272 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 IL11P20809 199 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 ELK4P28324 431 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 PRKAR1BP31321 381 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 PCGF2P35227 344 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 SFTPDP35247 375 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 CPA2P48052 419 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 GZMMP51124 257 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 CLDN15P56746 228 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 COPZ1P61923 177 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 PLAURQ03405 335 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 MERTKQ12866 999 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 SLC25A53Q5H9E4 307 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 PDSS1Q5T2R2 415 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 ERICH5Q6P6B1 374 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 POMZP3Q6PJE2 187 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 HACD2Q6Y1H2 254 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 PLEKHM3Q6ZWE6 761 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 P4HA3Q7Z4N8 544 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 CALHM3Q86XJ0 350 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 ARMC8Q8IUR7 673 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 GRAMD2AQ8IUY3 354 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 SLC26A7Q8TE54 656 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 CA5BP1Q8WTZ4 195 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 ZNF524Q96C55 264 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 REXO5Q96IC2 774 aaKnown RBP12.59□□□□□ -0.39
CCM2-217ENST00000492883 GPATCH1Q9BRR8 931 aaKnown RBP12.59□□□□□ -0.39
CCM2-217ENST00000492883 TAGLN3Q9UI15 199 aa12.59□□□□□ -0.39
CCM2-217ENST00000492883 CHST2Q9Y4C5 530 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms