RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 TMEM234Q8WY98 164 aa18.87■□□□□ 0.61
SEC13-217ENST00000482647 SMPDL3BQ92485 455 aa18.87■□□□□ 0.61
SEC13-217ENST00000482647 CNOT9Q92600 299 aaKnown RBP18.87■□□□□ 0.61
SEC13-217ENST00000482647 SDCCAG3Q96C92 435 aa18.87■□□□□ 0.61
SEC13-217ENST00000482647 CCDC106Q9BWC9 280 aa18.87■□□□□ 0.61
SEC13-217ENST00000482647 ARMC7Q9H6L4 198 aa18.87■□□□□ 0.61
SEC13-217ENST00000482647 NANOGQ9H9S0 305 aa18.87■□□□□ 0.61
SEC13-217ENST00000482647 ASH1LQ9NR48 2969 aaKnown RBP18.87■□□□□ 0.61
SEC13-217ENST00000482647 FLNBO75369 2602 aaKnown RBP18.87■□□□□ 0.61
SEC13-217ENST00000482647 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.86■□□□□ 0.61
SEC13-217ENST00000482647 A1L4Q6 167 aa18.86■□□□□ 0.61
SEC13-217ENST00000482647 SEC14L5O43304 696 aa18.86■□□□□ 0.61
SEC13-217ENST00000482647 BCAS1O75363 584 aaPredicted RBP18.86■□□□□ 0.61
SEC13-217ENST00000482647 ETS2P15036 469 aa18.86■□□□□ 0.61
SEC13-217ENST00000482647 CHRNB4P30926 498 aa18.86■□□□□ 0.61
SEC13-217ENST00000482647 TIMP3P35625 211 aa18.86■□□□□ 0.61
SEC13-217ENST00000482647 SUCLG1P53597 346 aaKnown RBP18.86■□□□□ 0.61
SEC13-217ENST00000482647 FOXF1Q12946 379 aa18.86■□□□□ 0.61
SEC13-217ENST00000482647 ART3Q13508 389 aa18.86■□□□□ 0.61
SEC13-217ENST00000482647 SCARB2Q14108 478 aa18.86■□□□□ 0.61
SEC13-217ENST00000482647 SELPLGQ14242 412 aa18.86■□□□□ 0.61
SEC13-217ENST00000482647 MRPL2Q5T653 305 aaKnown RBP18.86■□□□□ 0.61
SEC13-217ENST00000482647 RIPPLY2Q5TAB7 128 aa18.86■□□□□ 0.61
SEC13-217ENST00000482647 VRK2Q86Y07 508 aa18.86■□□□□ 0.61
SEC13-217ENST00000482647 KRT73Q86Y46 540 aa18.86■□□□□ 0.61
SEC13-217ENST00000482647 OR8J3Q8NGG0 315 aa18.86■□□□□ 0.61
SEC13-217ENST00000482647 CA5BP1Q8WTZ4 195 aa18.86■□□□□ 0.61
SEC13-217ENST00000482647 ST8SIA1Q92185 356 aa18.86■□□□□ 0.61
SEC13-217ENST00000482647 UCN2Q96RP3 112 aa18.86■□□□□ 0.61
SEC13-217ENST00000482647 NPAS1Q99742 590 aa18.86■□□□□ 0.61
SEC13-217ENST00000482647 TRIM8Q9BZR9 551 aa18.86■□□□□ 0.61
SEC13-217ENST00000482647 KAT8Q9H7Z6 458 aaKnown RBP18.86■□□□□ 0.61
SEC13-217ENST00000482647 RNF6Q9Y252 685 aa18.86■□□□□ 0.61
SEC13-217ENST00000482647 ZNF443Q9Y2A4 671 aaPredicted RBP18.86■□□□□ 0.61
SEC13-217ENST00000482647 ARL2BPQ9Y2Y0 163 aa18.86■□□□□ 0.61
SEC13-217ENST00000482647 HECTD1Q9ULT8 2610 aa18.86■□□□□ 0.61
SEC13-217ENST00000482647 DOPEY2Q9Y3R5 2298 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 CDHR4A6H8M9 788 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 CLCA1A8K7I4 914 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 HSPB2A8KAH6 182 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 ETV2O00321 342 aaPredicted RBP18.85■□□□□ 0.61
SEC13-217ENST00000482647 IL2RAP01589 272 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 COX4I1P13073 169 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 UQCRBP14927 111 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 ELK4P28324 431 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 RYKP34925 604 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 CLDN20P56880 219 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 RPS3AP61247 264 aaKnown RBP18.85■□□□□ 0.61
SEC13-217ENST00000482647 RBBP4Q09028 425 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 HSPB2Q16082 182 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 SLC25A53Q5H9E4 307 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 ZNF311Q5JNZ3 666 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 ZNF836Q6ZNA1 936 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 SEM1Q6ZVN7 128 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 MAMDC2Q7Z304 686 aaPredicted RBP18.85■□□□□ 0.61
SEC13-217ENST00000482647 SERPINA11Q86U17 422 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 CCDC71Q8IV32 467 aaPredicted RBP18.85■□□□□ 0.61
SEC13-217ENST00000482647 ZNF440Q8IYI8 595 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 LILRA2Q8N149 483 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 POU5F2Q8N7G0 328 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 C11orf65Q8NCR3 313 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 ZNF563Q8TA94 476 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 WNT2BQ93097 391 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 RCN3Q96D15 328 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 CMTM5Q96DZ9 223 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 SLC39A3Q9BRY0 314 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 SPATA5L1Q9BVQ7 753 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 MYLK2Q9H1R3 596 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 RLIMQ9NVW2 624 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 DNAJB12Q9NXW2 375 aaKnown RBP18.85■□□□□ 0.61
SEC13-217ENST00000482647 SPTBN1Q01082 2364 aaKnown RBP18.85■□□□□ 0.61
SEC13-217ENST00000482647 MED12Q93074 2177 aa18.85■□□□□ 0.61
SEC13-217ENST00000482647 A0A0G2JNJ9 132 aa18.84■□□□□ 0.61
SEC13-217ENST00000482647 GJE1A6NN92 205 aa18.84■□□□□ 0.61
SEC13-217ENST00000482647 FXYD1O00168 92 aa18.84■□□□□ 0.61
SEC13-217ENST00000482647 SERPINB7O75635 380 aa18.84■□□□□ 0.61
SEC13-217ENST00000482647 NTN1O95631 604 aa18.84■□□□□ 0.61
SEC13-217ENST00000482647 CLDN1O95832 211 aa18.84■□□□□ 0.61
SEC13-217ENST00000482647 PABPC4LP0CB38 370 aaKnown RBP18.84■□□□□ 0.61
SEC13-217ENST00000482647 CLDN15P56746 228 aa18.84■□□□□ 0.61
SEC13-217ENST00000482647 SESN3P58005 492 aa18.84■□□□□ 0.61
SEC13-217ENST00000482647 EEF1A1P68104 462 aaKnown RBP18.84■□□□□ 0.61
SEC13-217ENST00000482647 RNF220Q5VTB9 566 aa18.84■□□□□ 0.61
SEC13-217ENST00000482647 ADGRE4PQ86SQ3 457 aa18.84■□□□□ 0.61
SEC13-217ENST00000482647 HIPK4Q8NE63 616 aa18.84■□□□□ 0.61
SEC13-217ENST00000482647 OR10A6Q8NH74 314 aa18.84■□□□□ 0.61
SEC13-217ENST00000482647 ZNF524Q96C55 264 aa18.84■□□□□ 0.61
SEC13-217ENST00000482647 CCT8L2Q96SF2 557 aa18.84■□□□□ 0.61
SEC13-217ENST00000482647 ZNF607Q96SK3 696 aa18.84■□□□□ 0.61
SEC13-217ENST00000482647 TM9SF2Q99805 663 aa18.84■□□□□ 0.61
SEC13-217ENST00000482647 SPATA9Q9BWV2 254 aa18.84■□□□□ 0.61
SEC13-217ENST00000482647 TMEM185BQ9H7F4 350 aa18.84■□□□□ 0.61
SEC13-217ENST00000482647 ACER3Q9NUN7 267 aa18.84■□□□□ 0.61
SEC13-217ENST00000482647 PLEKHB1Q9UF11 243 aaPredicted RBP18.84■□□□□ 0.61
SEC13-217ENST00000482647 Q9UFV3 132 aa18.84■□□□□ 0.61
SEC13-217ENST00000482647 PRDM4Q9UKN5 801 aa18.84■□□□□ 0.61
SEC13-217ENST00000482647 ANGPT4Q9Y264 503 aa18.84■□□□□ 0.61
SEC13-217ENST00000482647 PTPN13Q12923 2485 aa18.84■□□□□ 0.61
SEC13-217ENST00000482647 MBD3L4A6NDZ8 208 aaPredicted RBP18.83■□□□□ 0.6
SEC13-217ENST00000482647 MBD3L3A6NE82 208 aaPredicted RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms