RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 P2RY13Q9BPV8 354 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 ZNF251Q9BRH9 671 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 PELOQ9BRX2 385 aaKnown RBP2.6□□□□□ -1.99
HMGN4-202ENST00000477243 FEM1AQ9BSK4 669 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 TM2D2Q9BX73 214 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 TEX101Q9BY14 249 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 DUSP16Q9BY84 665 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 UPF3BQ9BZI7 483 aaKnown RBP2.6□□□□□ -1.99
HMGN4-202ENST00000477243 VN1R1Q9GZP7 353 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 RAB6CQ9H0N0 254 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 OPN3Q9H1Y3 402 aaPredicted RBP2.6□□□□□ -1.99
HMGN4-202ENST00000477243 OR51V1Q9H2C8 321 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 TUBB1Q9H4B7 451 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 CHST11Q9NPF2 352 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 ZC4H2Q9NQZ6 224 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 ADARB2Q9NS39 739 aaKnown RBP2.6□□□□□ -1.99
HMGN4-202ENST00000477243 SEMA4GQ9NTN9 838 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.6□□□□□ -1.99
HMGN4-202ENST00000477243 PTTG3PQ9NZH4 202 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 ADA2Q9NZK5 511 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 ZNF319Q9P2F9 582 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 GHRLQ9UBU3 117 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 TESQ9UGI8 421 aaKnown RBP2.6□□□□□ -1.99
HMGN4-202ENST00000477243 IL36AQ9UHA7 158 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 SLC7A8Q9UHI5 535 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 PILRAQ9UKJ1 303 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 NUP50Q9UKX7 468 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 FZR1Q9UM11 496 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 ST3GAL5Q9UNP4 418 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 ZFR2Q9UPR6 939 aaKnown RBP2.6□□□□□ -1.99
HMGN4-202ENST00000477243 EIF3LQ9Y262 564 aaKnown RBP2.6□□□□□ -1.99
HMGN4-202ENST00000477243 KCTD3Q9Y597 815 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 SCN4AP35499 1836 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 FRMPD4Q14CM0 1322 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 BRCA1P38398 1863 aaKnown RBP2.6□□□□□ -1.99
HMGN4-202ENST00000477243 NUP155O75694 1391 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 USP54Q70EL1 1684 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 QRICH2Q9H0J4 1663 aa2.6□□□□□ -1.99
HMGN4-202ENST00000477243 ANKRD50Q9ULJ7 1429 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 ADAMTSL1Q8N6G6 1762 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 HERC2O95714 4834 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 FRMPD3Q5JV73 1810 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 A0A1B0GTI1 187 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 A0A1W2PP11 408 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 A0A1W2PRD5 423 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 TMEM213A2RRL7 107 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 MANSC4A6NHS7 340 aaPredicted RBP2.59□□□□□ -1.99
HMGN4-202ENST00000477243 OR6C70A6NIJ9 312 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 CCT8L1PA6NM43 557 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 RNASEK-C17orf49H0YIS7 233 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 TEX46H3BTG2 121 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 GAPDHSO14556 408 aaPredicted RBP2.59□□□□□ -1.99
HMGN4-202ENST00000477243 CYB561D2O14569 222 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 LIN7AO14910 233 aaPredicted RBP2.59□□□□□ -1.99
HMGN4-202ENST00000477243 EIF3HO15372 352 aaKnown RBP eCLIP2.59□□□□□ -1.99
HMGN4-202ENST00000477243 TRAPPC3O43617 180 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 ZIC3O60481 467 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 HUS1O60921 280 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 NDUFS6O75380 124 aaKnown RBP2.59□□□□□ -1.99
HMGN4-202ENST00000477243 NCR1O76036 304 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 LRATO95237 230 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 NDUFA10O95299 355 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 CST4P01036 141 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 MT-ND2P03891 347 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 WNT1P04628 370 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 F7P08709 466 aaPredicted RBP2.59□□□□□ -1.99
HMGN4-202ENST00000477243 CHRM5P08912 532 aaPredicted RBP2.59□□□□□ -1.99
HMGN4-202ENST00000477243 ALOX5P09917 674 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 H2BFMP0C1H6 154 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 CDK4P11802 303 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 CD59P13987 128 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 AOC1P19801 751 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 PGCP20142 388 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 IMPDH1P20839 514 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 IFNA8P32881 189 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 NKX2-1P43699 371 aaPredicted RBP2.59□□□□□ -1.99
HMGN4-202ENST00000477243 HTR5AP47898 357 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 MRPL19P49406 292 aaKnown RBP2.59□□□□□ -1.99
HMGN4-202ENST00000477243 DUSP3P51452 185 aaPredicted RBP2.59□□□□□ -1.99
HMGN4-202ENST00000477243 NOVA1P51513 510 aaKnown RBP2.59□□□□□ -1.99
HMGN4-202ENST00000477243 SEC61BP60468 96 aaKnown RBP2.59□□□□□ -1.99
HMGN4-202ENST00000477243 RPS18P62269 152 aaKnown RBP2.59□□□□□ -1.99
HMGN4-202ENST00000477243 CX3CL1P78423 397 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 CHRNB3Q05901 458 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 MFGE8Q08431 387 aaPredicted RBP2.59□□□□□ -1.99
HMGN4-202ENST00000477243 ZNF415Q09FC8 603 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 SLAMF1Q13291 335 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 PMS2P3Q13401 168 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 ILKQ13418 452 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 ART3Q13508 389 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 GPR50Q13585 617 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 GRB7Q14451 532 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 KRT81Q14533 505 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 DNAL1Q4LDG9 190 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 TTMPQ5BVD1 217 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 AGAP7PQ5VUJ5 663 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 PAPD7Q5XG87 772 aaKnown RBP2.59□□□□□ -1.99
HMGN4-202ENST00000477243 TIGD3Q6B0B8 471 aa2.59□□□□□ -1.99
HMGN4-202ENST00000477243 DMKNQ6E0U4 476 aaPredicted RBP2.59□□□□□ -1.99
HMGN4-202ENST00000477243 SCYL2Q6P3W7 929 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms