RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 TRBV5-3A0A0A0MS03 114 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 CLCA1A8K7I4 914 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 PRSS44E7EML9 344 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 EIF1AYO14602 144 aaKnown RBP12.41□□□□□ -0.42
USF1-205ENST00000473969 SNX3O60493 162 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 THBS1P07996 1170 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 LINGO3P0C6S8 592 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 ARAFP10398 606 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 GP1BBP13224 206 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 ELK4P28324 431 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 MTPNP58546 118 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 FOXF1Q12946 379 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 SKP2Q13309 424 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 SCARB2Q14108 478 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 CAPRIN1Q14444 709 aaKnown RBP12.41□□□□□ -0.42
USF1-205ENST00000473969 TMEM44Q2T9K0 475 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 ZNF311Q5JNZ3 666 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 RPS26P11Q5JNZ5 115 aaPredicted RBP12.41□□□□□ -0.42
USF1-205ENST00000473969 MRPL2Q5T653 305 aaKnown RBP12.41□□□□□ -0.42
USF1-205ENST00000473969 PPP4R4Q6NUP7 873 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 VRK2Q86Y07 508 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 CCDC71Q8IV32 467 aaPredicted RBP12.41□□□□□ -0.42
USF1-205ENST00000473969 LILRA2Q8N149 483 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 C11orf65Q8NCR3 313 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 ATP6V1C2Q8NEY4 427 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 WNT2BQ93097 391 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 LRRC58Q96CX6 371 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 ECSITQ9BQ95 431 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 PRRG4Q9BZD6 226 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 TMEM38AQ9H6F2 299 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 BCL2L10Q9HD36 194 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 TIGARQ9NQ88 270 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 SLC13A4Q9UKG4 626 aa12.41□□□□□ -0.42
USF1-205ENST00000473969 ZNF443Q9Y2A4 671 aaPredicted RBP12.41□□□□□ -0.42
USF1-205ENST00000473969 KLF2Q9Y5W3 355 aaPredicted RBP12.41□□□□□ -0.42
USF1-205ENST00000473969 SPIN1Q9Y657 262 aaPredicted RBP12.41□□□□□ -0.42
USF1-205ENST00000473969 RELNP78509 3460 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 CFAP73A6NFT4 308 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 CLDN24A6NM45 220 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 FBP2O00757 339 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 SERPINB7O75635 380 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 PGM3O95394 542 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 SYNGR4O95473 234 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 ETS2P15036 469 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 PRKCAP17252 672 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 RPS4Y1P22090 263 aaKnown RBP12.4□□□□□ -0.42
USF1-205ENST00000473969 HTR1EP28566 365 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 EIF1AXP47813 144 aaKnown RBP12.4□□□□□ -0.42
USF1-205ENST00000473969 CLDN15P56746 228 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 SESN3P58005 492 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 COPZ1P61923 177 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 RBBP4Q09028 425 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 MERTKQ12866 999 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 TOMM34Q15785 309 aaPredicted RBP12.4□□□□□ -0.42
USF1-205ENST00000473969 ESPNLQ6ZVH7 1005 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 ZNF550Q7Z398 422 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 SLC30A8Q8IWU4 369 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 HIPK4Q8NE63 616 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 LILRB4Q8NHJ6 448 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 CNOT9Q92600 299 aaKnown RBP12.4□□□□□ -0.42
USF1-205ENST00000473969 CMTM5Q96DZ9 223 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 LRRC46Q96FV0 321 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 REXO5Q96IC2 774 aaKnown RBP12.4□□□□□ -0.42
USF1-205ENST00000473969 ZFP3Q96NJ6 502 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 SPATA9Q9BWV2 254 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 PINK1Q9BXM7 581 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 TMEM185BQ9H7F4 350 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 CHST11Q9NPF2 352 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 KCNJ16Q9NPI9 418 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 ACER3Q9NUN7 267 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 PRDM4Q9UKN5 801 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 ARL2BPQ9Y2Y0 163 aa12.4□□□□□ -0.42
USF1-205ENST00000473969 DIDO1Q9BTC0 2240 aaKnown RBP12.39□□□□□ -0.43
USF1-205ENST00000473969 DSPPQ9NZW4 1301 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 A0A0G2JNJ9 132 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 MBD3L4A6NDZ8 208 aaPredicted RBP12.39□□□□□ -0.43
USF1-205ENST00000473969 MBD3L3A6NE82 208 aaPredicted RBP12.39□□□□□ -0.43
USF1-205ENST00000473969 PRORSD1PA6NEY8 169 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 MBD3L5A6NJ08 208 aaPredicted RBP12.39□□□□□ -0.43
USF1-205ENST00000473969 SLC22A20A6NK97 555 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 FAM90A27PA6NNH2 459 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 DVL2O14641 736 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 CLDN1O95832 211 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 OPN1LWP04000 364 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 FREM3P0C091 2139 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 PABPC4LP0CB38 370 aaKnown RBP12.39□□□□□ -0.43
USF1-205ENST00000473969 TMIGD3P0DMS9 266 aaPredicted RBP12.39□□□□□ -0.43
USF1-205ENST00000473969 COX4I1P13073 169 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 SLC7A1P30825 629 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 SFTPDP35247 375 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 APOBEC1P41238 236 aaKnown RBP12.39□□□□□ -0.43
USF1-205ENST00000473969 HTR3AP46098 478 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 IDH2P48735 452 aaKnown RBP12.39□□□□□ -0.43
USF1-205ENST00000473969 SUCLG1P53597 346 aaKnown RBP12.39□□□□□ -0.43
USF1-205ENST00000473969 CLDN20P56880 219 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 EEF1A1P68104 462 aaKnown RBP12.39□□□□□ -0.43
USF1-205ENST00000473969 SELENBP1Q13228 472 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 MAPK11Q15759 364 aa12.39□□□□□ -0.43
USF1-205ENST00000473969 SLC25A53Q5H9E4 307 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms