RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 QPRTQ15274 297 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 ACSF3Q4G176 576 aaPredicted RBP12.29□□□□□ -0.44
SSBP1-206ENST00000467681 SLC25A53Q5H9E4 307 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 SEM1Q6ZVN7 128 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 NCCRP1Q6ZVX7 275 aaPredicted RBP12.29□□□□□ -0.44
SSBP1-206ENST00000467681 NET1Q7Z628 596 aaPredicted RBP12.29□□□□□ -0.44
SSBP1-206ENST00000467681 MRGPRGQ86SM5 289 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 SERPINA11Q86U17 422 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 VRK2Q86Y07 508 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 PTOV1Q86YD1 416 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 CLIP4Q8N3C7 705 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 ANKS4BQ8N8V4 417 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 C11orf65Q8NCR3 313 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 OR10A6Q8NH74 314 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 FBXO27Q8NI29 283 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 WDR60Q8WVS4 1066 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 ITLN2Q8WWU7 325 aaPredicted RBP12.29□□□□□ -0.44
SSBP1-206ENST00000467681 RND1Q92730 232 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 RCN3Q96D15 328 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 CMTM5Q96DZ9 223 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 MRGPRX4Q96LA9 322 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 UCN2Q96RP3 112 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 TUBA1CQ9BQE3 449 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 SLC39A3Q9BRY0 314 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 EFCAB1Q9HAE3 211 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 ACER3Q9NUN7 267 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 RLIMQ9NVW2 624 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 PRDM4Q9UKN5 801 aa12.29□□□□□ -0.44
SSBP1-206ENST00000467681 UBR5O95071 2799 aaPredicted RBP12.29□□□□□ -0.44
SSBP1-206ENST00000467681 PHF3Q92576 2039 aaKnown RBP12.28□□□□□ -0.44
SSBP1-206ENST00000467681 CDHR4A6H8M9 788 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 AIM2O14862 343 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 SHOX2O60902 331 aaPredicted RBP12.28□□□□□ -0.44
SSBP1-206ENST00000467681 FAM107AO95990 144 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 PGCP20142 388 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 SLC6A8P48029 635 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 CCR4P51679 360 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 DLX5P56178 289 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 EEFSECP57772 596 aaKnown RBP12.28□□□□□ -0.44
SSBP1-206ENST00000467681 SESN3P58005 492 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 EEF1A1P68104 462 aaKnown RBP12.28□□□□□ -0.44
SSBP1-206ENST00000467681 SCARB2Q14108 478 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 CYP51A1Q16850 503 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 LIN52Q52LA3 116 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 RABL3Q5HYI8 236 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 ZNF311Q5JNZ3 666 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 MRPL2Q5T653 305 aaKnown RBP12.28□□□□□ -0.44
SSBP1-206ENST00000467681 NSUN5P2Q63ZY6 315 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 ADGRE4PQ86SQ3 457 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 CALHM3Q86XJ0 350 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 ZZZ3Q8IYH5 903 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 ZNF440Q8IYI8 595 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 ZNF808Q8N4W9 903 aaPredicted RBP12.28□□□□□ -0.44
SSBP1-206ENST00000467681 MEIOBQ8N635 442 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 TMCO5AQ8N6Q1 288 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 HIPK4Q8NE63 616 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 TMEM234Q8WY98 164 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 ST8SIA1Q92185 356 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 RNF145Q96MT1 663 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 ECSITQ9BQ95 431 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 SPATA9Q9BWV2 254 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 RSPO3Q9BXY4 272 aaPredicted RBP12.28□□□□□ -0.44
SSBP1-206ENST00000467681 CACYBPQ9HB71 228 aaKnown RBP12.28□□□□□ -0.44
SSBP1-206ENST00000467681 DNAJB12Q9NXW2 375 aaKnown RBP12.28□□□□□ -0.44
SSBP1-206ENST00000467681 ZNF443Q9Y2A4 671 aaPredicted RBP12.28□□□□□ -0.44
SSBP1-206ENST00000467681 CHST2Q9Y4C5 530 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 SPENQ96T58 3664 aaKnown RBP12.28□□□□□ -0.44
SSBP1-206ENST00000467681 NCOA6Q14686 2063 aaPredicted RBP12.28□□□□□ -0.44
SSBP1-206ENST00000467681 PTPN13Q12923 2485 aa12.28□□□□□ -0.44
SSBP1-206ENST00000467681 CFAP73A6NFT4 308 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 H0Y3Z8 333 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 H3BML4 177 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 ADAMDEC1O15204 470 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 ADAM11O75078 769 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 TOXO94900 526 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 PABPC4LP0CB38 370 aaKnown RBP12.27□□□□□ -0.45
SSBP1-206ENST00000467681 IL11P20809 199 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 CEACAM8P31997 349 aaPredicted RBP12.27□□□□□ -0.45
SSBP1-206ENST00000467681 RYKP34925 604 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 TIMP3P35625 211 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 CLDN20P56880 219 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 FOXF1Q12946 379 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 ART3Q13508 389 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 RIPPLY2Q5TAB7 128 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 RNF220Q5VTB9 566 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 HACD2Q6Y1H2 254 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 ZNF836Q6ZNA1 936 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 CHMP1BQ7LBR1 199 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 KRT73Q86Y46 540 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 GRAMD2AQ8IUY3 354 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 LACC1Q8IV20 430 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 SLC30A8Q8IWU4 369 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 OR10Q1Q8NGQ4 319 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 WNT2BQ93097 391 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 ZNF583Q96ND8 569 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 LRRC37BQ96QE4 947 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 TRIB1Q96RU8 372 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 ZNF607Q96SK3 696 aa12.27□□□□□ -0.45
SSBP1-206ENST00000467681 HOPXQ9BPY8 73 aaPredicted RBP12.27□□□□□ -0.45
SSBP1-206ENST00000467681 GPATCH1Q9BRR8 931 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms