RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 HSMCR30P0CW71 290 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 ETS2P15036 469 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 IL32P24001 234 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 GTF2E2P29084 291 aaKnown RBP2.88□□□□□ -1.95
VPS8-215ENST00000460158 GNA11P29992 359 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 PPP2R1BP30154 601 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 HOXA9P31269 272 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 PRKAR2BP31323 418 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 KCNJ3P48549 501 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 ARRB1P49407 418 aaPredicted RBP2.88□□□□□ -1.95
VPS8-215ENST00000460158 CDC34P49427 236 aaPredicted RBP2.88□□□□□ -1.95
VPS8-215ENST00000460158 PSMD7P51665 324 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 PAX9P55771 341 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 CDK16Q00536 496 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 IRF8Q02556 426 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 ILKQ13418 452 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 CDH18Q13634 790 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 GRB14Q14449 540 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 GANABQ14697 944 aaKnown RBP2.88□□□□□ -1.95
VPS8-215ENST00000460158 VAMP3Q15836 100 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 CCDC6Q16204 474 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 SYPL1Q16563 259 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 KNOP1Q1ED39 458 aaKnown RBP2.88□□□□□ -1.95
VPS8-215ENST00000460158 PTPN20Q4JDL3 420 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 CDKL4Q5MAI5 379 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 OR4C11Q6IEV9 310 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 RFWD3Q6PCD5 774 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 TMIGD1Q6UXZ0 262 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 PLEKHG7Q6ZR37 379 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 PAGE2Q7Z2X7 111 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 DPY19L4Q7Z388 723 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 SERPINA9Q86WD7 417 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 RCOR2Q8IZ40 523 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 SLC38A6Q8IZM9 456 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 ARHGAP18Q8N392 663 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 FBXL16Q8N461 479 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 CCDC185Q8N715 623 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 GATSQ8NAP1 163 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 FBXO36Q8NEA4 188 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 TTLQ8NG68 377 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 OR2T6Q8NHC8 308 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 HCAR2Q8TDS4 363 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 GATAD1Q8WUU5 269 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 RPL3LQ92901 407 aaKnown RBP2.88□□□□□ -1.95
VPS8-215ENST00000460158 LHX4Q969G2 390 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 TM4SF19Q96DZ7 209 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 ZNF274Q96GC6 653 aaPredicted RBP2.88□□□□□ -1.95
VPS8-215ENST00000460158 ZNF486Q96H40 463 aaPredicted RBP2.88□□□□□ -1.95
VPS8-215ENST00000460158 SH3YL1Q96HL8 342 aaPredicted RBP2.88□□□□□ -1.95
VPS8-215ENST00000460158 AKR1E2Q96JD6 320 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 CXorf58Q96LI9 332 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 CASD1Q96PB1 797 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 CDCA3Q99618 268 aaPredicted RBP2.88□□□□□ -1.95
VPS8-215ENST00000460158 COPS8Q99627 209 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 NKX3-1Q99801 234 aaPredicted RBP2.88□□□□□ -1.95
VPS8-215ENST00000460158 C7orf50Q9BRJ6 194 aaKnown RBP2.88□□□□□ -1.95
VPS8-215ENST00000460158 MED10Q9BTT4 135 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 DPH7Q9BTV6 452 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 FUNDC2Q9BWH2 189 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 RBM24Q9BX46 236 aaKnown RBP2.88□□□□□ -1.95
VPS8-215ENST00000460158 CLEC7AQ9BXN2 247 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 GANQ9H2C0 597 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 EGLN3Q9H6Z9 239 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 METTL8Q9H825 291 aaKnown RBP2.88□□□□□ -1.95
VPS8-215ENST00000460158 SLC38A10Q9HBR0 1119 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 RAVER2Q9HCJ3 691 aaKnown RBP2.88□□□□□ -1.95
VPS8-215ENST00000460158 MYOZ2Q9NPC6 264 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 ADAP2Q9NPF8 381 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 MRPL40Q9NQ50 206 aaKnown RBP2.88□□□□□ -1.95
VPS8-215ENST00000460158 UFSP2Q9NUQ7 469 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 SMOXQ9NWM0 555 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 MS4A12Q9NXJ0 267 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 ADAM22Q9P0K1 906 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 PSMC3IPQ9P2W1 217 aaPredicted RBP2.88□□□□□ -1.95
VPS8-215ENST00000460158 ZNF229Q9UJW7 825 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 IKZF2Q9UKS7 526 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 ZNF346Q9UL40 294 aaKnown RBP2.88□□□□□ -1.95
VPS8-215ENST00000460158 TMED7Q9Y3B3 224 aa2.88□□□□□ -1.95
VPS8-215ENST00000460158 POLR3AO14802 1390 aaPredicted RBP2.87□□□□□ -1.95
VPS8-215ENST00000460158 TRAV18A0A075B6X5 111 aa2.87□□□□□ -1.95
VPS8-215ENST00000460158 PPIAL4CA0A0B4J2A2 164 aa2.87□□□□□ -1.95
VPS8-215ENST00000460158 TRBV4-1A0A0J9YWV2 114 aa2.87□□□□□ -1.95
VPS8-215ENST00000460158 MTMR11A4FU01 709 aa2.87□□□□□ -1.95
VPS8-215ENST00000460158 GOLGA6L4A6NEF3 574 aa2.87□□□□□ -1.95
VPS8-215ENST00000460158 SMCO2A6NFE2 343 aa2.87□□□□□ -1.95
VPS8-215ENST00000460158 H3BQV1 296 aa2.87□□□□□ -1.95
VPS8-215ENST00000460158 NBR2O15453 112 aa2.87□□□□□ -1.95
VPS8-215ENST00000460158 RS1O15537 224 aa2.87□□□□□ -1.95
VPS8-215ENST00000460158 CYTH3O43739 400 aa2.87□□□□□ -1.95
VPS8-215ENST00000460158 MAGEC1O60732 1142 aa2.87□□□□□ -1.95
VPS8-215ENST00000460158 N4BP1O75113 896 aaKnown RBP2.87□□□□□ -1.95
VPS8-215ENST00000460158 KRT33AO76009 404 aa2.87□□□□□ -1.95
VPS8-215ENST00000460158 OR2F2O95006 317 aa2.87□□□□□ -1.95
VPS8-215ENST00000460158 CST1P01037 141 aa2.87□□□□□ -1.95
VPS8-215ENST00000460158 MT-ND2P03891 347 aa2.87□□□□□ -1.95
VPS8-215ENST00000460158 GSTT2P0CG29 244 aa2.87□□□□□ -1.95
VPS8-215ENST00000460158 GSTT2BP0CG30 244 aa2.87□□□□□ -1.95
VPS8-215ENST00000460158 PPIAL4GP0DN37 164 aa2.87□□□□□ -1.95
VPS8-215ENST00000460158 MLNP12872 115 aa2.87□□□□□ -1.95
VPS8-215ENST00000460158 CD59P13987 128 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms