RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 P2RX6O15547 441 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 SEMA4FO95754 770 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 TP53P04637 393 aaPredicted RBP11.29□□□□□ -0.6
SEC16A-207ENST00000453963 PPP3CBP16298 524 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 PTBP1P26599 531 aaKnown RBP eCLIP11.29□□□□□ -0.6
SEC16A-207ENST00000453963 HNRNPKP61978 463 aaKnown RBP eCLIP11.29□□□□□ -0.65e-6■■■■□ 19.6
SEC16A-207ENST00000453963 SEMA3BQ13214 749 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 TBPL2Q6SJ96 375 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 IL22RA1Q8N6P7 574 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 ACOT4Q8N9L9 421 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 SDR9C7Q8NEX9 313 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 DOK4Q8TEW6 326 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 THAP3Q8WTV1 239 aaPredicted RBP11.29□□□□□ -0.6
SEC16A-207ENST00000453963 ZBTB8AQ96BR9 441 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 LPAR4Q99677 370 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 SULT4A1Q9BR01 284 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 FZD3Q9NPG1 666 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 MAN2C1Q9NTJ4 1040 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 ASIC5Q9NY37 505 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 GLTPQ9NZD2 209 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 CA14Q9ULX7 337 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 YARS2Q9Y2Z4 477 aaKnown RBP11.29□□□□□ -0.6
SEC16A-207ENST00000453963 NUP98P52948 1817 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 A0A0D9SG52 128 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 PDGFAP04085 211 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 FBXO45P0C2W1 286 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 IL1RNP18510 177 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 THBS2P35442 1172 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 ETV6P41212 452 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 TAS2R19P59542 299 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 RPS25P62851 125 aaKnown RBP11.29□□□□□ -0.6
SEC16A-207ENST00000453963 SF3B4Q15427 424 aaKnown RBP eCLIP11.29□□□□□ -0.61e-6■■■■□ 25.8
SEC16A-207ENST00000453963 HENMT1Q5T8I9 393 aaKnown RBP11.29□□□□□ -0.6
SEC16A-207ENST00000453963 RPL22L1Q6P5R6 122 aaKnown RBP11.29□□□□□ -0.6
SEC16A-207ENST00000453963 RFPL4BQ6ZWI9 263 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 PLXDC1Q8IUK5 500 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 FOXJ1Q92949 421 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 GPR78Q96P69 363 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 CASD1Q96PB1 797 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 KCNJ16Q9NPI9 418 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 C5P01031 1676 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 TVP23AA6NH52 213 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 GPR39O43194 453 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 UBL3O95164 117 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 CRABP1P29762 137 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 IDUAP35475 653 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 CAV3P56539 151 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 CSNK2A1P68400 391 aaPredicted RBP11.29□□□□□ -0.6
SEC16A-207ENST00000453963 SYPL1Q16563 259 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 XKR7Q5GH72 579 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 ENTPD8Q5MY95 495 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 LYPD4Q6UWN0 246 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 APOOLQ6UXV4 268 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 ZNF546Q86UE3 836 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 ZNF611Q8N823 705 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 CSNK2A3Q8NEV1 391 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 KHSRPQ92945 711 aaKnown RBP eCLIP11.29□□□□□ -0.61e-6■■□□□ 12.7
SEC16A-207ENST00000453963 ZNF419Q96HQ0 510 aaPredicted RBP11.29□□□□□ -0.6
SEC16A-207ENST00000453963 SORBS1Q9BX66 1292 aaKnown RBP11.29□□□□□ -0.6
SEC16A-207ENST00000453963 EMC7Q9NPA0 242 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 PRDM9Q9NQV7 894 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 ZNF226Q9NYT6 803 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 RARRES3Q9UL19 164 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 F5P12259 2224 aa11.29□□□□□ -0.6
SEC16A-207ENST00000453963 FAM183AA6NL82 134 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 ZNF195O14628 629 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 SYT7O43581 403 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 SLC26A5P58743 744 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 PPA1Q15181 289 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 RAET1LQ5VY80 246 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 DPPA4Q7L190 304 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 MRPL43Q8N983 215 aaKnown RBP11.28□□□□□ -0.6
SEC16A-207ENST00000453963 TSACCQ96A04 125 aaPredicted RBP11.28□□□□□ -0.6
SEC16A-207ENST00000453963 KLF16Q9BXK1 252 aaPredicted RBP11.28□□□□□ -0.6
SEC16A-207ENST00000453963 TPSD1Q9BZJ3 242 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 TUBB1Q9H4B7 451 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 DCDC2BA2VCK2 349 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 HOXC13P31276 330 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 GALK2Q01415 458 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 UBE2NLQ5JXB2 153 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 USP53Q70EK8 1073 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 MEX3DQ86XN8 651 aaKnown RBP11.28□□□□□ -0.6
SEC16A-207ENST00000453963 ACBD4Q8NC06 268 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 MYLIPQ8WY64 445 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 TMEM68Q96MH6 324 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 PITX2Q99697 317 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 OCEL1Q9H607 264 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 USP36Q9P275 1121 aaKnown RBP11.28□□□□□ -0.6
SEC16A-207ENST00000453963 SCML1Q9UN30 329 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 BOLA1Q9Y3E2 137 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 RGPD5Q99666 1765 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 ANKRD34BA5PLL1 514 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 ANKRD33BA6NCL7 494 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 TTLL8A6PVC2 850 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 H3BQ06 376 aaPredicted RBP11.28□□□□□ -0.6
SEC16A-207ENST00000453963 LCMT2O60294 686 aaKnown RBP11.28□□□□□ -0.6
SEC16A-207ENST00000453963 LILRB3O75022 631 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 ZNF217O75362 1048 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 ALX3O95076 343 aa11.28□□□□□ -0.6
SEC16A-207ENST00000453963 PSMB10P40306 273 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms