RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 MANSC1Q9H8J5 431 aa14.35□□□□□ -0.11
SGCE-208ENST00000450385 AIG1Q9NVV5 245 aa14.35□□□□□ -0.11
SGCE-208ENST00000450385 WDR45Q9Y484 360 aa14.35□□□□□ -0.11
SGCE-208ENST00000450385 SHISA8B8ZZ34 492 aa14.34□□□□□ -0.11
SGCE-208ENST00000450385 SDHDO14521 159 aa14.34□□□□□ -0.11
SGCE-208ENST00000450385 CXCL13O43927 109 aa14.34□□□□□ -0.11
SGCE-208ENST00000450385 GMFGO60234 142 aa14.34□□□□□ -0.11
SGCE-208ENST00000450385 UGT2B17O75795 530 aa14.34□□□□□ -0.11
SGCE-208ENST00000450385 PRKD3O94806 890 aa14.34□□□□□ -0.11
SGCE-208ENST00000450385 CSTAP01040 98 aa14.34□□□□□ -0.11
SGCE-208ENST00000450385 CHI3L1P36222 383 aaPredicted RBP14.34□□□□□ -0.11
SGCE-208ENST00000450385 APOBEC1P41238 236 aaKnown RBP14.34□□□□□ -0.11
SGCE-208ENST00000450385 SLC6A8P48029 635 aa14.34□□□□□ -0.11
SGCE-208ENST00000450385 CLK1P49759 484 aaKnown RBP14.34□□□□□ -0.11
SGCE-208ENST00000450385 KHKP50053 298 aa14.34□□□□□ -0.11
SGCE-208ENST00000450385 RIPPLY3P57055 190 aa14.34□□□□□ -0.11
SGCE-208ENST00000450385 KEAP1Q14145 624 aa14.34□□□□□ -0.11
SGCE-208ENST00000450385 GPR68Q15743 365 aa14.34□□□□□ -0.11
SGCE-208ENST00000450385 FAM174BQ3ZCQ3 159 aa14.34□□□□□ -0.11
SGCE-208ENST00000450385 SPANXN4Q5MJ08 99 aa14.34□□□□□ -0.11
SGCE-208ENST00000450385 PDZK1Q5T2W1 519 aa14.34□□□□□ -0.11
SGCE-208ENST00000450385 C3orf33Q6P1S2 294 aa14.34□□□□□ -0.11
SGCE-208ENST00000450385 MSANTD1Q6ZTZ1 278 aa14.34□□□□□ -0.11
SGCE-208ENST00000450385 ANKRD42Q8N9B4 389 aa14.34□□□□□ -0.11
SGCE-208ENST00000450385 RNF128Q8TEB7 428 aa14.34□□□□□ -0.11
SGCE-208ENST00000450385 SLC25A43Q8WUT9 341 aaPredicted RBP14.34□□□□□ -0.11
SGCE-208ENST00000450385 NUDT8Q8WV74 236 aa14.34□□□□□ -0.11
SGCE-208ENST00000450385 TLCD1Q96CP7 247 aa14.34□□□□□ -0.11
SGCE-208ENST00000450385 MAELQ96JY0 434 aaKnown RBP14.34□□□□□ -0.11
SGCE-208ENST00000450385 TRNT1Q96Q11 434 aaKnown RBP14.34□□□□□ -0.11
SGCE-208ENST00000450385 OPN3Q9H1Y3 402 aaPredicted RBP14.34□□□□□ -0.11
SGCE-208ENST00000450385 OR51I1Q9H343 314 aa14.34□□□□□ -0.11
SGCE-208ENST00000450385 TMBIM4Q9HC24 238 aa14.34□□□□□ -0.11
SGCE-208ENST00000450385 EXOSC3Q9NQT5 275 aaKnown RBP14.34□□□□□ -0.11
SGCE-208ENST00000450385 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.34□□□□□ -0.11
SGCE-208ENST00000450385 BEX4Q9NWD9 120 aaPredicted RBP14.34□□□□□ -0.11
SGCE-208ENST00000450385 THUMPD1Q9NXG2 353 aaKnown RBP14.34□□□□□ -0.11
SGCE-208ENST00000450385 MARCOQ9UEW3 520 aaPredicted RBP14.34□□□□□ -0.11
SGCE-208ENST00000450385 GPR52Q9Y2T5 361 aa14.34□□□□□ -0.11
SGCE-208ENST00000450385 GPR45Q9Y5Y3 372 aa14.34□□□□□ -0.11
SGCE-208ENST00000450385 SPIN1Q9Y657 262 aaPredicted RBP14.34□□□□□ -0.11
SGCE-208ENST00000450385 CCDC154A6NI56 674 aa14.33□□□□□ -0.12
SGCE-208ENST00000450385 KIAA0513O60268 411 aa14.33□□□□□ -0.12
SGCE-208ENST00000450385 FCMRO60667 390 aa14.33□□□□□ -0.12
SGCE-208ENST00000450385 CPSF4O95639 269 aaKnown RBP14.33□□□□□ -0.12
SGCE-208ENST00000450385 KRT75O95678 551 aa14.33□□□□□ -0.12
SGCE-208ENST00000450385 PSMB1P20618 241 aaKnown RBP14.33□□□□□ -0.12
SGCE-208ENST00000450385 SLC7A1P30825 629 aa14.33□□□□□ -0.12
SGCE-208ENST00000450385 MAGOHP61326 146 aaKnown RBP14.33□□□□□ -0.12
SGCE-208ENST00000450385 SIRPAP78324 504 aa14.33□□□□□ -0.12
SGCE-208ENST00000450385 FOXF1Q12946 379 aa14.33□□□□□ -0.12
SGCE-208ENST00000450385 SKP2Q13309 424 aa14.33□□□□□ -0.12
SGCE-208ENST00000450385 GNA13Q14344 377 aa14.33□□□□□ -0.12
SGCE-208ENST00000450385 ZNF239Q16600 458 aaKnown RBP14.33□□□□□ -0.12
SGCE-208ENST00000450385 ZSWIM7Q19AV6 140 aa14.33□□□□□ -0.12
SGCE-208ENST00000450385 TMEM176BQ3YBM2 270 aaPredicted RBP14.33□□□□□ -0.12
SGCE-208ENST00000450385 TMEM201Q5SNT2 666 aa14.33□□□□□ -0.12
SGCE-208ENST00000450385 ZNF614Q8N883 585 aa14.33□□□□□ -0.12
SGCE-208ENST00000450385 FAM71CQ8NEG0 241 aa14.33□□□□□ -0.12
SGCE-208ENST00000450385 PIWIL2Q8TC59 973 aaKnown RBP14.33□□□□□ -0.12
SGCE-208ENST00000450385 ZFP90Q8TF47 636 aa14.33□□□□□ -0.12
SGCE-208ENST00000450385 ROPN1LQ96C74 230 aa14.33□□□□□ -0.12
SGCE-208ENST00000450385 OR52E6Q96RD3 313 aa14.33□□□□□ -0.12
SGCE-208ENST00000450385 PANX1Q96RD7 426 aa14.33□□□□□ -0.12
SGCE-208ENST00000450385 PIP5K1AQ99755 562 aa14.33□□□□□ -0.12
SGCE-208ENST00000450385 SLC35A5Q9BS91 424 aa14.33□□□□□ -0.12
SGCE-208ENST00000450385 SERHL2Q9H4I8 314 aa14.33□□□□□ -0.12
SGCE-208ENST00000450385 MTHFD2LQ9H903 347 aaPredicted RBP14.33□□□□□ -0.12
SGCE-208ENST00000450385 ACER3Q9NUN7 267 aa14.33□□□□□ -0.12
SGCE-208ENST00000450385 ZFHX3Q15911 3703 aa14.32□□□□□ -0.12
SGCE-208ENST00000450385 DNPH1O43598 174 aa14.32□□□□□ -0.12
SGCE-208ENST00000450385 EFNA2O43921 213 aa14.32□□□□□ -0.12
SGCE-208ENST00000450385 TMCC2O75069 709 aa14.32□□□□□ -0.12
SGCE-208ENST00000450385 ATE1O95260 518 aa14.32□□□□□ -0.12
SGCE-208ENST00000450385 TGDSO95455 350 aa14.32□□□□□ -0.12
SGCE-208ENST00000450385 CNOT4O95628 575 aaKnown RBP14.32□□□□□ -0.12
SGCE-208ENST00000450385 YES1P07947 543 aa14.32□□□□□ -0.12
SGCE-208ENST00000450385 ALDOCP09972 364 aaKnown RBP14.32□□□□□ -0.12
SGCE-208ENST00000450385 OR12D1P0DN82 309 aa14.32□□□□□ -0.12
SGCE-208ENST00000450385 FOSL1P15407 271 aa14.32□□□□□ -0.12
SGCE-208ENST00000450385 FPR1P21462 350 aa14.32□□□□□ -0.12
SGCE-208ENST00000450385 SFTPDP35247 375 aa14.32□□□□□ -0.12
SGCE-208ENST00000450385 HTR3AP46098 478 aa14.32□□□□□ -0.12
SGCE-208ENST00000450385 UFM1P61960 85 aa14.32□□□□□ -0.12
SGCE-208ENST00000450385 CSNK2A1P68400 391 aaPredicted RBP14.32□□□□□ -0.12
SGCE-208ENST00000450385 IRX1P78414 480 aaPredicted RBP14.32□□□□□ -0.12
SGCE-208ENST00000450385 KCNJ10P78508 379 aa14.32□□□□□ -0.12
SGCE-208ENST00000450385 HPCAP84074 193 aa14.32□□□□□ -0.12
SGCE-208ENST00000450385 QPRTQ15274 297 aa14.32□□□□□ -0.12
SGCE-208ENST00000450385 DEFB113Q30KQ7 82 aa14.32□□□□□ -0.12
SGCE-208ENST00000450385 PDCD4Q53EL6 469 aaKnown RBP14.32□□□□□ -0.12
SGCE-208ENST00000450385 AGBL2Q5U5Z8 902 aa14.32□□□□□ -0.12
SGCE-208ENST00000450385 LRRC74BQ6ZQY2 392 aa14.32□□□□□ -0.12
SGCE-208ENST00000450385 ANKRD46Q86W74 232 aa14.32□□□□□ -0.12
SGCE-208ENST00000450385 TGIF2LYQ8IUE0 185 aa14.32□□□□□ -0.12
SGCE-208ENST00000450385 ZNF619Q8N2I2 560 aa14.32□□□□□ -0.12
SGCE-208ENST00000450385 NRGNQ92686 78 aa14.32□□□□□ -0.12
SGCE-208ENST00000450385 PIGTQ969N2 578 aa14.32□□□□□ -0.12
SGCE-208ENST00000450385 NPAS1Q99742 590 aa14.32□□□□□ -0.12
SGCE-208ENST00000450385 TMUB1Q9BVT8 246 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms