RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 TESQ9UGI8 421 aaKnown RBP14.34□□□□□ -0.11
USP40-206ENST00000443711 ANAPC2Q9UJX6 822 aa14.34□□□□□ -0.11
USP40-206ENST00000443711 V9GYQ6 96 aa14.34□□□□□ -0.11
USP40-206ENST00000443711 ATRXP46100 2492 aa14.34□□□□□ -0.11
USP40-206ENST00000443711 ATMQ13315 3056 aa14.33□□□□□ -0.11
USP40-206ENST00000443711 AP3D1O14617 1153 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 FMO6PO60774 539 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 ADAM11O75078 769 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 IFNW1P05000 195 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 HPNP05981 417 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 UMPSP11172 480 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 GP1BBP13224 206 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 TNFRSF1BP20333 461 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 MAGEA5P43359 124 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 OR1E2P47887 323 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 IDH2P48735 452 aaKnown RBP14.33□□□□□ -0.12
USP40-206ENST00000443711 ZNF136P52737 540 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 HOXC5Q00444 222 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 SLC10A1Q14973 349 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 QPRTQ15274 297 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 GLYR1Q49A26 553 aaPredicted RBP14.33□□□□□ -0.12
USP40-206ENST00000443711 ARSKQ6UWY0 536 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 ZNF771Q7L3S4 317 aaPredicted RBP14.33□□□□□ -0.12
USP40-206ENST00000443711 CISD2Q8N5K1 135 aaKnown RBP14.33□□□□□ -0.12
USP40-206ENST00000443711 FAM86B1Q8N7N1 296 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 OR4D11Q8NGI4 311 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 OR6T1Q8NGN1 323 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 OR14L1PQ8NHC6 308 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 ST8SIA1Q92185 356 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 MCHR1Q99705 422 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 KLHDC3Q9BQ90 382 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 WFDC6Q9BQY6 131 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 TRIM2Q9C040 744 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 OR2B2Q9GZK3 357 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 ACER3Q9NUN7 267 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 MED17Q9NVC6 651 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 VDAC3Q9Y277 283 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 SPTA1P02549 2419 aa14.33□□□□□ -0.12
USP40-206ENST00000443711 ZIC3O60481 467 aa14.32□□□□□ -0.12
USP40-206ENST00000443711 HOXB6P17509 224 aaKnown RBP14.32□□□□□ -0.12
USP40-206ENST00000443711 EIF1P41567 113 aaKnown RBP14.32□□□□□ -0.12
USP40-206ENST00000443711 CHRNB3Q05901 458 aa14.32□□□□□ -0.12
USP40-206ENST00000443711 NFATC3Q12968 1075 aa14.32□□□□□ -0.12
USP40-206ENST00000443711 TOMM34Q15785 309 aaPredicted RBP14.32□□□□□ -0.12
USP40-206ENST00000443711 PLPPR5Q32ZL2 321 aa14.32□□□□□ -0.12
USP40-206ENST00000443711 FAM98BQ52LJ0 330 aaKnown RBP14.32□□□□□ -0.12
USP40-206ENST00000443711 WBP2NLQ6ICG8 309 aa14.32□□□□□ -0.12
USP40-206ENST00000443711 RBM45Q8IUH3 476 aaKnown RBP14.32□□□□□ -0.12
USP40-206ENST00000443711 LACC1Q8IV20 430 aa14.32□□□□□ -0.12
USP40-206ENST00000443711 CADM2Q8N3J6 435 aa14.32□□□□□ -0.12
USP40-206ENST00000443711 FAM83FQ8NEG4 500 aaPredicted RBP14.32□□□□□ -0.12
USP40-206ENST00000443711 ZBTB8AQ96BR9 441 aa14.32□□□□□ -0.12
USP40-206ENST00000443711 SLC47A1Q96FL8 570 aa14.32□□□□□ -0.12
USP40-206ENST00000443711 SEPHS2Q99611 448 aa14.32□□□□□ -0.12
USP40-206ENST00000443711 DEFB127Q9H1M4 99 aa14.32□□□□□ -0.12
USP40-206ENST00000443711 MAGIXQ9H6Y5 334 aa14.32□□□□□ -0.12
USP40-206ENST00000443711 ZDHHC11Q9H8X9 412 aa14.32□□□□□ -0.12
USP40-206ENST00000443711 TMEM27Q9HBJ8 222 aa14.32□□□□□ -0.12
USP40-206ENST00000443711 ACKR4Q9NPB9 350 aa14.32□□□□□ -0.12
USP40-206ENST00000443711 RPS6KB2Q9UBS0 482 aa14.32□□□□□ -0.12
USP40-206ENST00000443711 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.31□□□□□ -0.12
USP40-206ENST00000443711 TCRBV3S1A0A5B6 114 aa14.31□□□□□ -0.12
USP40-206ENST00000443711 GPIP06744 558 aa14.31□□□□□ -0.12
USP40-206ENST00000443711 PRKCAP17252 672 aa14.31□□□□□ -0.12
USP40-206ENST00000443711 SLC1A3P43003 542 aa14.31□□□□□ -0.12
USP40-206ENST00000443711 HTR3AP46098 478 aa14.31□□□□□ -0.12
USP40-206ENST00000443711 SESN3P58005 492 aa14.31□□□□□ -0.12
USP40-206ENST00000443711 NPTX1Q15818 432 aa14.31□□□□□ -0.12
USP40-206ENST00000443711 SLC25A53Q5H9E4 307 aa14.31□□□□□ -0.12
USP40-206ENST00000443711 COLEC12Q5KU26 742 aa14.31□□□□□ -0.12
USP40-206ENST00000443711 DEF8Q6ZN54 512 aa14.31□□□□□ -0.12
USP40-206ENST00000443711 YRDCQ86U90 279 aaKnown RBP14.31□□□□□ -0.12
USP40-206ENST00000443711 C10orf67Q8IYJ2 551 aa14.31□□□□□ -0.12
USP40-206ENST00000443711 LSMEM1Q8N8F7 131 aa14.31□□□□□ -0.12
USP40-206ENST00000443711 RSRC1Q96IZ7 334 aaKnown RBP14.31□□□□□ -0.12
USP40-206ENST00000443711 C7orf34Q96L11 122 aa14.31□□□□□ -0.12
USP40-206ENST00000443711 PRR14Q9BWN1 585 aa14.31□□□□□ -0.12
USP40-206ENST00000443711 AMBRA1Q9C0C7 1298 aa14.31□□□□□ -0.12
USP40-206ENST00000443711 POLR2J2Q9GZM3 115 aaKnown RBP14.31□□□□□ -0.12
USP40-206ENST00000443711 POLR2J3Q9H1A7 115 aaKnown RBP14.31□□□□□ -0.12
USP40-206ENST00000443711 AGPAT4Q9NRZ5 378 aa14.31□□□□□ -0.12
USP40-206ENST00000443711 DNAJC13O75165 2243 aa14.3□□□□□ -0.12
USP40-206ENST00000443711 ZNF407Q9C0G0 2248 aa14.3□□□□□ -0.12
USP40-206ENST00000443711 DHRS12A0PJE2 317 aa14.3□□□□□ -0.12
USP40-206ENST00000443711 C7orf72A4D263 438 aa14.3□□□□□ -0.12
USP40-206ENST00000443711 TTLL8A6PVC2 850 aa14.3□□□□□ -0.12
USP40-206ENST00000443711 ANKRD65E5RJM6 399 aa14.3□□□□□ -0.12
USP40-206ENST00000443711 NPIPA5E9PKD4 350 aa14.3□□□□□ -0.12
USP40-206ENST00000443711 ETV2O00321 342 aaPredicted RBP14.3□□□□□ -0.12
USP40-206ENST00000443711 TPST2O60704 377 aa14.3□□□□□ -0.12
USP40-206ENST00000443711 SEMG1P04279 462 aa14.3□□□□□ -0.12
USP40-206ENST00000443711 CELA3AP09093 270 aa14.3□□□□□ -0.12
USP40-206ENST00000443711 ITGA2P17301 1181 aa14.3□□□□□ -0.12
USP40-206ENST00000443711 TCEA1P23193 301 aaKnown RBP14.3□□□□□ -0.12
USP40-206ENST00000443711 PSMA4P25789 261 aaKnown RBP14.3□□□□□ -0.12
USP40-206ENST00000443711 HTR2AP28223 471 aa14.3□□□□□ -0.12
USP40-206ENST00000443711 ADH6P28332 368 aa14.3□□□□□ -0.12
USP40-206ENST00000443711 IFNA8P32881 189 aa14.3□□□□□ -0.12
USP40-206ENST00000443711 GCKP35557 465 aa14.3□□□□□ -0.12
USP40-206ENST00000443711 DLX5P56178 289 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms