RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 KCNJ10P78508 379 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 CBFBQ13951 182 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 RGNQ15493 299 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 CTU2Q2VPK5 515 aaKnown RBP11.81□□□□□ -0.52
SSB-203ENST00000413002 LRRC74BQ6ZQY2 392 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 LUZP2Q86TE4 346 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 ARFGAP2Q8N6H7 521 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 CNEP1R1Q8N9A8 125 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 TOR1AIP2Q8NFQ8 470 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 OR10D3Q8NH80 312 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 SLC38A5Q8WUX1 472 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 DNAJA3Q96EY1 480 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 ADGRG7Q96K78 797 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 UCN2Q96RP3 112 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 ZNF385DQ9H6B1 395 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 HHATLQ9HCP6 504 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 VAPAQ9P0L0 249 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 ZNF629Q9UEG4 869 aaPredicted RBP11.81□□□□□ -0.52
SSB-203ENST00000413002 CLEC4AQ9UMR7 237 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 LIPT1Q9Y234 373 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 CACNA1DQ01668 2161 aa11.81□□□□□ -0.52
SSB-203ENST00000413002 LRBAP50851 2863 aa11.8□□□□□ -0.52
SSB-203ENST00000413002 C7orf72A4D263 438 aa11.8□□□□□ -0.52
SSB-203ENST00000413002 AGAP5A6NIR3 686 aa11.8□□□□□ -0.52
SSB-203ENST00000413002 AP3D1O14617 1153 aa11.8□□□□□ -0.52
SSB-203ENST00000413002 TFPTP0C1Z6 253 aa11.8□□□□□ -0.52
SSB-203ENST00000413002 TROVE2P10155 538 aaKnown RBP eCLIP11.8□□□□□ -0.52
SSB-203ENST00000413002 IGFBP2P18065 325 aa11.8□□□□□ -0.52
SSB-203ENST00000413002 ME2P23368 584 aa11.8□□□□□ -0.52
SSB-203ENST00000413002 OPRM1P35372 400 aa11.8□□□□□ -0.52
SSB-203ENST00000413002 SUMO3P55854 103 aaPredicted RBP11.8□□□□□ -0.52
SSB-203ENST00000413002 EEFSECP57772 596 aaKnown RBP11.8□□□□□ -0.52
SSB-203ENST00000413002 SESN3P58005 492 aa11.8□□□□□ -0.52
SSB-203ENST00000413002 RPS3AP61247 264 aaKnown RBP11.8□□□□□ -0.52
SSB-203ENST00000413002 TMEM176BQ3YBM2 270 aaPredicted RBP11.8□□□□□ -0.52
SSB-203ENST00000413002 LRIF1Q5T3J3 769 aa11.8□□□□□ -0.52
SSB-203ENST00000413002 HBMQ6B0K9 141 aa11.8□□□□□ -0.52
SSB-203ENST00000413002 VWA1Q6PCB0 445 aa11.8□□□□□ -0.52
SSB-203ENST00000413002 VRK2Q86Y07 508 aa11.8□□□□□ -0.52
SSB-203ENST00000413002 METTL25Q8N6Q8 603 aa11.8□□□□□ -0.52
SSB-203ENST00000413002 ACBD4Q8NC06 268 aa11.8□□□□□ -0.52
SSB-203ENST00000413002 OSTF1Q92882 214 aa11.8□□□□□ -0.52
SSB-203ENST00000413002 TMEM19Q96HH6 336 aa11.8□□□□□ -0.52
SSB-203ENST00000413002 SPOCK3Q9BQ16 436 aa11.8□□□□□ -0.52
SSB-203ENST00000413002 IKZF5Q9H5V7 419 aa11.8□□□□□ -0.52
SSB-203ENST00000413002 MTHFD2LQ9H903 347 aaPredicted RBP11.8□□□□□ -0.52
SSB-203ENST00000413002 MED4Q9NPJ6 270 aa11.8□□□□□ -0.52
SSB-203ENST00000413002 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.8□□□□□ -0.52
SSB-203ENST00000413002 RLIMQ9NVW2 624 aa11.8□□□□□ -0.52
SSB-203ENST00000413002 P2RX2Q9UBL9 471 aa11.8□□□□□ -0.52
SSB-203ENST00000413002 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.8□□□□□ -0.52
SSB-203ENST00000413002 TRIM33Q9UPN9 1127 aa11.8□□□□□ -0.52
SSB-203ENST00000413002 ARHGAP21Q5T5U3 1957 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 A0A1W2PNR3 127 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 A0A1W2PNV4 684 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 A0A1W2PP18 115 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 TNFSF13O75888 250 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 SMNDC1O75940 238 aaKnown RBP eCLIP11.79□□□□□ -0.52
SSB-203ENST00000413002 NTN1O95631 604 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 GUSBP08236 651 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 IL7RP16871 459 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 CCNA2P20248 432 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 MDH1P40925 334 aaKnown RBP11.79□□□□□ -0.52
SSB-203ENST00000413002 EIF1P41567 113 aaKnown RBP11.79□□□□□ -0.52
SSB-203ENST00000413002 ASCL1P50553 236 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 ARFIP2P53365 341 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 MERTKQ12866 999 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 AP1ARQ63HQ0 302 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 RETREG3Q86VR2 466 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 DMRTC2Q8IXT2 367 aaPredicted RBP11.79□□□□□ -0.52
SSB-203ENST00000413002 FAM71CQ8NEG0 241 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 OR52P1PQ8NH57 321 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 OR2V1Q8NHB1 315 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 ZNF563Q8TA94 476 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 WDR60Q8WVS4 1066 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 ROBO4Q8WZ75 1007 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 KLHL15Q96M94 604 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 TREX2Q9BQ50 279 aaPredicted RBP11.79□□□□□ -0.52
SSB-203ENST00000413002 SRXN1Q9BYN0 137 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 PRRG4Q9BZD6 226 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 RABEP2Q9H5N1 569 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 DNAJB12Q9NXW2 375 aaKnown RBP11.79□□□□□ -0.52
SSB-203ENST00000413002 STOML1Q9UBI4 398 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 SLC35A3Q9Y2D2 325 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 GPC6Q9Y625 555 aaPredicted RBP11.79□□□□□ -0.52
SSB-203ENST00000413002 APCP25054 2843 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 TACC2O95359 2948 aa11.79□□□□□ -0.52
SSB-203ENST00000413002 INTS1Q8N201 2190 aaKnown RBP11.78□□□□□ -0.52
SSB-203ENST00000413002 TRBV5-3A0A0A0MS03 114 aa11.78□□□□□ -0.52
SSB-203ENST00000413002 SYT5O00445 386 aa11.78□□□□□ -0.52
SSB-203ENST00000413002 ADAMDEC1O15204 470 aa11.78□□□□□ -0.52
SSB-203ENST00000413002 DNAJA2O60884 412 aa11.78□□□□□ -0.52
SSB-203ENST00000413002 GKN3PP0CG01 181 aa11.78□□□□□ -0.52
SSB-203ENST00000413002 PGCP20142 388 aa11.78□□□□□ -0.52
SSB-203ENST00000413002 KLK2P20151 261 aa11.78□□□□□ -0.52
SSB-203ENST00000413002 KIR2DL2P43627 348 aaPredicted RBP11.78□□□□□ -0.52
SSB-203ENST00000413002 IDH2P48735 452 aaKnown RBP11.78□□□□□ -0.52
SSB-203ENST00000413002 CRISP3P54108 245 aa11.78□□□□□ -0.52
SSB-203ENST00000413002 CARD18P57730 90 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms