RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 CCDC163A0A0D9SF12 145 aa6.96□□□□□ -1.29
PTPN3-203ENST00000412145 RFXAPO00287 272 aa6.96□□□□□ -1.29
PTPN3-203ENST00000412145 LALBAP00709 142 aa6.96□□□□□ -1.29
PTPN3-203ENST00000412145 HOXB2P14652 356 aa6.96□□□□□ -1.29
PTPN3-203ENST00000412145 DGKEP52429 567 aa6.96□□□□□ -1.29
PTPN3-203ENST00000412145 RNF4P78317 190 aa6.96□□□□□ -1.29
PTPN3-203ENST00000412145 EARS2Q5JPH6 523 aaKnown RBP6.96□□□□□ -1.29
PTPN3-203ENST00000412145 WBP2NLQ6ICG8 309 aa6.96□□□□□ -1.29
PTPN3-203ENST00000412145 ZDHHC24Q6UX98 284 aa6.96□□□□□ -1.29
PTPN3-203ENST00000412145 MFSD6LQ8IWD5 586 aa6.96□□□□□ -1.29
PTPN3-203ENST00000412145 RBMXL3Q8N7X1 1067 aaKnown RBP6.96□□□□□ -1.29
PTPN3-203ENST00000412145 OR14L1PQ8NHC6 308 aa6.96□□□□□ -1.29
PTPN3-203ENST00000412145 SAMD8Q96LT4 415 aa6.96□□□□□ -1.29
PTPN3-203ENST00000412145 MED18Q9BUE0 208 aa6.96□□□□□ -1.29
PTPN3-203ENST00000412145 QRSL1Q9H0R6 528 aaKnown RBP6.96□□□□□ -1.29
PTPN3-203ENST00000412145 NSUN3Q9H649 340 aaKnown RBP6.96□□□□□ -1.29
PTPN3-203ENST00000412145 HRASLS2Q9NWW9 162 aa6.96□□□□□ -1.29
PTPN3-203ENST00000412145 RNF11Q9Y3C5 154 aa6.96□□□□□ -1.29
PTPN3-203ENST00000412145 CCDC88AQ3V6T2 1871 aa6.96□□□□□ -1.29
PTPN3-203ENST00000412145 A6NCN8 305 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 PLRG1O43660 514 aaKnown RBP6.96□□□□□ -1.3
PTPN3-203ENST00000412145 BPIFB3P59826 476 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 ZNF91Q05481 1191 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 RNF212Q495C1 297 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 SFT2D3Q587I9 215 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 TECRLQ5HYJ1 363 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 CISD2Q8N5K1 135 aaKnown RBP6.96□□□□□ -1.3
PTPN3-203ENST00000412145 ZFP90Q8TF47 636 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 ARHGAP39Q9C0H5 1083 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 YJEFN3A6XGL0 299 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 PPP5D1E7EU14 171 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 FGF4P08620 206 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 EVI2BP34910 448 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 TMEM115Q12893 351 aaPredicted RBP6.96□□□□□ -1.3
PTPN3-203ENST00000412145 KLF1Q13351 362 aaPredicted RBP6.96□□□□□ -1.3
PTPN3-203ENST00000412145 ABHD17BQ5VST6 288 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 CDCA2Q69YH5 1023 aaPredicted RBP6.96□□□□□ -1.3
PTPN3-203ENST00000412145 BTNL8Q6UX41 500 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 ABHD11Q8NFV4 315 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 OR4K5Q8NGD3 323 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 OR4A16Q8NH70 328 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 CNIH3Q8TBE1 160 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 KIR2DS1A0A191URI9 304 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 TMEM82A0PJX8 343 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 METTL15A6NJ78 407 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 ENPP3O14638 875 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 SLC43A1O75387 559 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 TACR1P25103 407 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 NAA10P41227 235 aaPredicted RBP6.96□□□□□ -1.3
PTPN3-203ENST00000412145 KIR2DS4P43632 304 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 SLC25A11Q02978 314 aaKnown RBP6.96□□□□□ -1.3
PTPN3-203ENST00000412145 KIR2DS3Q14952 304 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 KIR2DS1Q14954 304 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.96□□□□□ -1.3
PTPN3-203ENST00000412145 COMMD1Q8N668 190 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 SYNPRQ8TBG9 265 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 GAB3Q8WWW8 586 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 APH1AQ96BI3 265 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 ECHDC3Q96DC8 303 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 ACSS1Q9NUB1 689 aaPredicted RBP6.96□□□□□ -1.3
PTPN3-203ENST00000412145 ZDHHC7Q9NXF8 308 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 NKX6-3A6NJ46 265 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 H3BMQ9 156 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 NUDT21O43809 227 aaKnown RBP6.96□□□□□ -1.3
PTPN3-203ENST00000412145 MRPL3P09001 348 aaKnown RBP6.96□□□□□ -1.3
PTPN3-203ENST00000412145 BMP1P13497 986 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 ELK4P28324 431 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 PPP1R3AQ16821 1122 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 PPP2R2DQ66LE6 453 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 CATSPERDQ86XM0 798 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 PRSS58Q8IYP2 241 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 OR4E2Q8NGC2 313 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 ARSGQ96EG1 525 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 KIRREL1Q96J84 757 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 VRTNQ9H8Y1 702 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 GALPQ9UBC7 116 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 ZNF281Q9Y2X9 895 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 SDC3O75056 442 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 SOX18P35713 384 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 SDHAF4Q5VUM1 108 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 TMEM236Q5W0B7 351 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 OR52E2Q8NGJ4 325 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 ARMC5Q96C12 935 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 C12orf42Q96LP6 360 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 SLC46A1Q96NT5 459 aa6.96□□□□□ -1.3
PTPN3-203ENST00000412145 RYDENQ9NUL5 291 aaKnown RBP6.96□□□□□ -1.3
PTPN3-203ENST00000412145 MEIOCA2RUB1 952 aa6.95□□□□□ -1.3
PTPN3-203ENST00000412145 C11orf98E9PRG8 122 aa6.95□□□□□ -1.3
PTPN3-203ENST00000412145 SLC31A2O15432 143 aa6.95□□□□□ -1.3
PTPN3-203ENST00000412145 TRAF3IP2O43734 574 aaPredicted RBP6.95□□□□□ -1.3
PTPN3-203ENST00000412145 JTBO76095 146 aa6.95□□□□□ -1.3
PTPN3-203ENST00000412145 DDAH2O95865 285 aa6.95□□□□□ -1.3
PTPN3-203ENST00000412145 HOXC13P31276 330 aa6.95□□□□□ -1.3
PTPN3-203ENST00000412145 HOXD12P35452 270 aa6.95□□□□□ -1.3
PTPN3-203ENST00000412145 BTG1P62324 171 aa6.95□□□□□ -1.3
PTPN3-203ENST00000412145 GPR17Q13304 367 aa6.95□□□□□ -1.3
PTPN3-203ENST00000412145 ODF4Q2M2E3 257 aa6.95□□□□□ -1.3
PTPN3-203ENST00000412145 ACSM3Q53FZ2 586 aa6.95□□□□□ -1.3
PTPN3-203ENST00000412145 PRAMEF8Q5VWM4 474 aa6.95□□□□□ -1.3
PTPN3-203ENST00000412145 PRAMEF7Q5VXH5 474 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms