RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 MEIOBQ8N635 442 aa17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 POU5F2Q8N7G0 328 aa17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 OR8J3Q8NGG0 315 aa17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 NFKBIDQ8NI38 313 aa17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 POC1BQ8TC44 478 aa17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 CNOT9Q92600 299 aaKnown RBP17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 MRGPRX4Q96LA9 322 aa17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 TUBA1CQ9BQE3 449 aa17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 CALHM2Q9HA72 323 aa17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 CACYBPQ9HB71 228 aaKnown RBP17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 GID8Q9NWU2 228 aa17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 DNAJB12Q9NXW2 375 aaKnown RBP17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 ZNF232Q9UNY5 417 aa17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 ARL2BPQ9Y2Y0 163 aa17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 IFT52Q9Y366 437 aa17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 HEATR5AQ86XA9 2040 aa17.91■□□□□ 0.46
PDLIM2-207ENST00000409417 NCOA6Q14686 2063 aaPredicted RBP17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 NTN1O95631 604 aa17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 PGCP20142 388 aa17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 ELK4P28324 431 aa17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 EEFSECP57772 596 aaKnown RBP17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 RAC1P63000 192 aa17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 RBBP4Q09028 425 aa17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 FOXF1Q12946 379 aa17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 SCARB2Q14108 478 aa17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 QPRTQ15274 297 aa17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 CYP51A1Q16850 503 aa17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 SLC25A53Q5H9E4 307 aa17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 SEM1Q6ZVN7 128 aa17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 ADGRE4PQ86SQ3 457 aa17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 SERPINA11Q86U17 422 aa17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 VRK2Q86Y07 508 aa17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 TREML1Q86YW5 311 aa17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 C11orf65Q8NCR3 313 aa17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 FBXO27Q8NI29 283 aa17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 ST8SIA1Q92185 356 aa17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 ZNF524Q96C55 264 aa17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 UCN2Q96RP3 112 aa17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 CCT8L2Q96SF2 557 aa17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 COQ3Q9NZJ6 369 aa17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 ZNF443Q9Y2A4 671 aaPredicted RBP17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 PHF3Q92576 2039 aaKnown RBP17.9■□□□□ 0.46
PDLIM2-207ENST00000409417 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.89■□□□□ 0.45
PDLIM2-207ENST00000409417 CDHR4A6H8M9 788 aa17.89■□□□□ 0.45
PDLIM2-207ENST00000409417 ME2P23368 584 aa17.89■□□□□ 0.45
PDLIM2-207ENST00000409417 RYKP34925 604 aa17.89■□□□□ 0.45
PDLIM2-207ENST00000409417 SLC6A8P48029 635 aa17.89■□□□□ 0.45
PDLIM2-207ENST00000409417 SUCLG1P53597 346 aaKnown RBP17.89■□□□□ 0.45
PDLIM2-207ENST00000409417 CLDN15P56746 228 aa17.89■□□□□ 0.45
PDLIM2-207ENST00000409417 CLDN20P56880 219 aa17.89■□□□□ 0.45
PDLIM2-207ENST00000409417 EEF1A1P68104 462 aaKnown RBP17.89■□□□□ 0.45
PDLIM2-207ENST00000409417 RABL3Q5HYI8 236 aa17.89■□□□□ 0.45
PDLIM2-207ENST00000409417 RNF220Q5VTB9 566 aa17.89■□□□□ 0.45
PDLIM2-207ENST00000409417 ZNF836Q6ZNA1 936 aa17.89■□□□□ 0.45
PDLIM2-207ENST00000409417 NET1Q7Z628 596 aaPredicted RBP17.89■□□□□ 0.45
PDLIM2-207ENST00000409417 KRT73Q86Y46 540 aa17.89■□□□□ 0.45
PDLIM2-207ENST00000409417 PTOV1Q86YD1 416 aa17.89■□□□□ 0.45
PDLIM2-207ENST00000409417 UBQLNLQ8IYU4 475 aa17.89■□□□□ 0.45
PDLIM2-207ENST00000409417 OR10Q1Q8NGQ4 319 aa17.89■□□□□ 0.45
PDLIM2-207ENST00000409417 TMEM234Q8WY98 164 aa17.89■□□□□ 0.45
PDLIM2-207ENST00000409417 RCN3Q96D15 328 aa17.89■□□□□ 0.45
PDLIM2-207ENST00000409417 TRIB1Q96RU8 372 aa17.89■□□□□ 0.45
PDLIM2-207ENST00000409417 ARMC7Q9H6L4 198 aa17.89■□□□□ 0.45
PDLIM2-207ENST00000409417 RLIMQ9NVW2 624 aa17.89■□□□□ 0.45
PDLIM2-207ENST00000409417 CLCA1A8K7I4 914 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 KDM4EB2RXH2 506 aaPredicted RBP17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 TIMP3P35625 211 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 SESN3P58005 492 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 ZNF311Q5JNZ3 666 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 RIPPLY2Q5TAB7 128 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 CHMP1BQ7LBR1 199 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 GGNQ86UU5 652 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 GRAMD2AQ8IUY3 354 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 ZNF440Q8IYI8 595 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 HIPK4Q8NE63 616 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 OR10A6Q8NH74 314 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 SMPDL3BQ92485 455 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 SDCCAG3Q96C92 435 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 CMTM5Q96DZ9 223 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 SPATA9Q9BWV2 254 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 ADAM21Q9UKJ8 722 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 RNF6Q9Y252 685 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 CFAP73A6NFT4 308 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 H0YC42 278 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 SEC14L5O43304 696 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 SHOX2O60902 331 aaPredicted RBP17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 ADAM11O75078 769 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 TOXO94900 526 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 PABPC4LP0CB38 370 aaKnown RBP17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 CHRNB4P30926 498 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 TPD52P55327 224 aaPredicted RBP17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 DLX5P56178 289 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 ART3Q13508 389 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 CLIP4Q8N3C7 705 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 ASB5Q8WWX0 329 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 WNT2BQ93097 391 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 ZNF607Q96SK3 696 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 ECSITQ9BQ95 431 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 SPATA5L1Q9BVQ7 753 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 EFCAB1Q9HAE3 211 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms