RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 PRAMEF7Q5VXH5 474 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 REEP3Q6NUK4 255 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 PTOV1Q86YD1 416 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 OR10A6Q8NH74 314 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 FBXO27Q8NI29 283 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 BBS10Q8TAM1 723 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 TRIB1Q96RU8 372 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 TUBA1CQ9BQE3 449 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 PIF1Q9H611 641 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 RLIMQ9NVW2 624 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 GID8Q9NWU2 228 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 ADAM21Q9UKJ8 722 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 ZNF443Q9Y2A4 671 aaPredicted RBP13.16□□□□□ -0.3
CDPF1-203ENST00000404583 ARL2BPQ9Y2Y0 163 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 DOPEY1Q5JWR5 2465 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 DOCK7Q96N67 2140 aa13.16□□□□□ -0.3
CDPF1-203ENST00000404583 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 C7orf72A4D263 438 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 SEC14L5O43304 696 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 DNAJA2O60884 412 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 ADAM11O75078 769 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 EPPINO95925 133 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 ZNF17P17021 662 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 PRKCAP17252 672 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 IL11P20809 199 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 SLC6A2P23975 617 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 PTGER4P35408 488 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 SMSP52788 366 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 CLDN20P56880 219 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 CYP51A1Q16850 503 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 LIN52Q52LA3 116 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 RABL3Q5HYI8 236 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 PLXDC2Q6UX71 529 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 ZNF836Q6ZNA1 936 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 SEM1Q6ZVN7 128 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 MED12LQ86YW9 2145 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 CMIPQ8IY22 773 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 METTL25Q8N6Q8 603 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 OR10Q1Q8NGQ4 319 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 ZPLD1Q8TCW7 415 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 RND1Q92730 232 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 DNAJB12Q9NXW2 375 aaKnown RBP13.15□□□□□ -0.3
CDPF1-203ENST00000404583 ZNF232Q9UNY5 417 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 GPC6Q9Y625 555 aaPredicted RBP13.15□□□□□ -0.3
CDPF1-203ENST00000404583 AP4B1Q9Y6B7 739 aa13.15□□□□□ -0.3
CDPF1-203ENST00000404583 A1L4Q6 167 aa13.14□□□□□ -0.31
CDPF1-203ENST00000404583 AIM2O14862 343 aa13.14□□□□□ -0.31
CDPF1-203ENST00000404583 EFNA2O43921 213 aa13.14□□□□□ -0.31
CDPF1-203ENST00000404583 THBS1P07996 1170 aa13.14□□□□□ -0.31
CDPF1-203ENST00000404583 PABPC4LP0CB38 370 aaKnown RBP13.14□□□□□ -0.31
CDPF1-203ENST00000404583 ETS2P15036 469 aa13.14□□□□□ -0.31
CDPF1-203ENST00000404583 PGCP20142 388 aa13.14□□□□□ -0.31
CDPF1-203ENST00000404583 AQP1P29972 269 aa13.14□□□□□ -0.31
CDPF1-203ENST00000404583 EIF1P41567 113 aaKnown RBP13.14□□□□□ -0.31
CDPF1-203ENST00000404583 GZMMP51124 257 aa13.14□□□□□ -0.31
CDPF1-203ENST00000404583 EEF1A1P68104 462 aaKnown RBP13.14□□□□□ -0.31
CDPF1-203ENST00000404583 LARS2Q15031 903 aaKnown RBP13.14□□□□□ -0.31
CDPF1-203ENST00000404583 SF3B4Q15427 424 aaKnown RBP eCLIP13.14□□□□□ -0.31
CDPF1-203ENST00000404583 CDSNQ15517 529 aa13.14□□□□□ -0.31
CDPF1-203ENST00000404583 ZNF311Q5JNZ3 666 aa13.14□□□□□ -0.31
CDPF1-203ENST00000404583 NSUN5P2Q63ZY6 315 aa13.14□□□□□ -0.31
CDPF1-203ENST00000404583 ZZZ3Q8IYH5 903 aa13.14□□□□□ -0.31
CDPF1-203ENST00000404583 CLIP4Q8N3C7 705 aa13.14□□□□□ -0.31
CDPF1-203ENST00000404583 ZNF808Q8N4W9 903 aaPredicted RBP13.14□□□□□ -0.31
CDPF1-203ENST00000404583 MEIOBQ8N635 442 aa13.14□□□□□ -0.31
CDPF1-203ENST00000404583 C11orf65Q8NCR3 313 aa13.14□□□□□ -0.31
CDPF1-203ENST00000404583 OR8J3Q8NGG0 315 aa13.14□□□□□ -0.31
CDPF1-203ENST00000404583 SDCCAG3Q96C92 435 aa13.14□□□□□ -0.31
CDPF1-203ENST00000404583 SH3GL1Q99961 368 aa13.14□□□□□ -0.31
CDPF1-203ENST00000404583 RSPO3Q9BXY4 272 aaPredicted RBP13.14□□□□□ -0.31
CDPF1-203ENST00000404583 TMEM185BQ9H7F4 350 aa13.14□□□□□ -0.31
CDPF1-203ENST00000404583 CACYBPQ9HB71 228 aaKnown RBP13.14□□□□□ -0.31
CDPF1-203ENST00000404583 EXOSC3Q9NQT5 275 aaKnown RBP13.14□□□□□ -0.31
CDPF1-203ENST00000404583 IFT52Q9Y366 437 aa13.14□□□□□ -0.31
CDPF1-203ENST00000404583 CHST2Q9Y4C5 530 aa13.14□□□□□ -0.31
CDPF1-203ENST00000404583 CACNA1CQ13936 2221 aa13.14□□□□□ -0.31
CDPF1-203ENST00000404583 CDHR4A6H8M9 788 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 CLCA1A8K7I4 914 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 AP3D1O14617 1153 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 SHOX2O60902 331 aaPredicted RBP13.13□□□□□ -0.31
CDPF1-203ENST00000404583 TOXO94900 526 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 CLDN1O95832 211 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 FAM107AO95990 144 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 GKN3PP0CG01 181 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 ADH6P28332 368 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 IDH2P48735 452 aaKnown RBP13.13□□□□□ -0.31
CDPF1-203ENST00000404583 SESN3P58005 492 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 RAC1P63000 192 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 SLC25A53Q5H9E4 307 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 RNF220Q5VTB9 566 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 XKRXQ6PP77 449 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 NET1Q7Z628 596 aaPredicted RBP13.13□□□□□ -0.31
CDPF1-203ENST00000404583 ADGRE4PQ86SQ3 457 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 SERPINA11Q86U17 422 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 GGNQ86UU5 652 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 LACC1Q8IV20 430 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 CCDC71Q8IV32 467 aaPredicted RBP13.13□□□□□ -0.31
CDPF1-203ENST00000404583 HIPK4Q8NE63 616 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 TNIP2Q8NFZ5 429 aa13.13□□□□□ -0.31
CDPF1-203ENST00000404583 ZNF563Q8TA94 476 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms