RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 VRK2Q86Y07 508 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 ZNF295-AS1Q8N0V1 137 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 LILRA2Q8N149 483 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 ARFGAP2Q8N6H7 521 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 METTL25Q8N6Q8 603 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 CNEP1R1Q8N9A8 125 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 FAM71CQ8NEG0 241 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 TOR1AIP2Q8NFQ8 470 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 OR5W2Q8NH69 310 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 OR10D3Q8NH80 312 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 SLC38A5Q8WUX1 472 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 WDR60Q8WVS4 1066 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 TMEM19Q96HH6 336 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 ADGRG7Q96K78 797 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 TRNT1Q96Q11 434 aaKnown RBP6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 SRXN1Q9BYN0 137 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 LAT2Q9GZY6 243 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 SAP130Q9H0E3 1048 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 MED4Q9NPJ6 270 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 RLIMQ9NVW2 624 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 P2RX2Q9UBL9 471 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 AP4B1Q9Y6B7 739 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 SPTBN1Q01082 2364 aaKnown RBP6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 AKAP9Q99996 3911 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 TRBV5-3A0A0A0MS03 114 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 IGHV3-15A0A0B4J1V0 119 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 A0A1W2PNR3 127 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 A0A1W2PNV4 684 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 A0A1W2PP18 115 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 AGAP5A6NIR3 686 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 C3orf80F5H4A9 247 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 FRS3O43559 492 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 EIF4E2O60573 245 aaKnown RBP6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 TNFSF13O75888 250 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 SMNDC1O75940 238 aaKnown RBP eCLIP6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 RCBTB2O95199 551 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 NTN1O95631 604 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 GKN3PP0CG01 181 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 IGFBP2P18065 325 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 CCNA2P20248 432 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 RPS4Y1P22090 263 aaKnown RBP6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 CPOXP36551 454 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 MDH1P40925 334 aaKnown RBP6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 ASCL1P50553 236 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 ANXA11P50995 505 aaKnown RBP6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 ARFIP2P53365 341 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 GYS2P54840 703 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 SUMO3P55854 103 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 SESN3P58005 492 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 MTPNP58546 118 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 KRTAP10-9P60411 292 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 RPS3AP61247 264 aaKnown RBP6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 RAC1P63000 192 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 KCNJ10P78508 379 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 CAPRIN1Q14444 709 aaKnown RBP6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 SLC25A35Q3KQZ1 300 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 TMEM176BQ3YBM2 270 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 GCNT6Q5T4J0 391 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 MRPL2Q5T653 305 aaKnown RBP6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 HBMQ6B0K9 141 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 DLEU7Q6UYE1 221 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 DHDDSQ86SQ9 333 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 ACBD4Q8NC06 268 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 OR2V1Q8NHB1 315 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 NFKBIDQ8NI38 313 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 ROBO4Q8WZ75 1007 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 KLHL15Q96M94 604 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 UCN2Q96RP3 112 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 TM9SF2Q99805 663 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 TREX2Q9BQ50 279 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 CPPED1Q9BRF8 314 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 SLC39A3Q9BRY0 314 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 RSPO3Q9BXY4 272 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 ENKD1Q9H0I2 346 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 OPN3Q9H1Y3 402 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 COQ10BQ9H8M1 238 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 POLE3Q9NRF9 147 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 DNAJB12Q9NXW2 375 aaKnown RBP6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 ZNF629Q9UEG4 869 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 TRIM33Q9UPN9 1127 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 LIPT1Q9Y234 373 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 ZNF443Q9Y2A4 671 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 SLC35A3Q9Y2D2 325 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 NDUFAF1Q9Y375 327 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 CHST2Q9Y4C5 530 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 DNAJC13O75165 2243 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 GTF3C1Q12789 2109 aa6.88□□□□□ -1.31
HMGB3P1-201ENST00000393368 DSPPQ9NZW4 1301 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 LINC01387J3KSC0 135 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 FBP2O00757 339 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 ANGPT2O15123 496 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 ADAMDEC1O15204 470 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 DBIP07108 87 aaKnown RBP6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 GUSBP08236 651 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 PRG2P13727 222 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 IL7RP16871 459 aa6.87□□□□□ -1.31
HMGB3P1-201ENST00000393368 PGCP20142 388 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms