RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 CT45A1Q5HYN5 189 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 SLC35F2Q8IXU6 374 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 CT45A3Q8NHU0 189 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 VWDEQ8N2E2 1590 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 PTPRUQ92729 1446 aa16.25■□□□□ 0.19
COL27A1-201ENST00000356083 VNN1O95497 513 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 ARHGAP1Q07960 439 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 SBSNQ6UWP8 590 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 FAM96BQ9Y3D0 163 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 LTN1O94822 1766 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 TSTD3H0UI37 97 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 FANCGO15287 622 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 MAKP20794 623 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 BCKDHBP21953 392 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 CRABP1P29762 137 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 RPL13AP40429 203 aaKnown RBP16.24■□□□□ 0.19
COL27A1-201ENST00000356083 RAB13P51153 203 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 STC1P52823 247 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 PMPCAQ10713 525 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 CNN3Q15417 329 aaKnown RBP16.24■□□□□ 0.19
COL27A1-201ENST00000356083 FAM199XQ6PEV8 388 aaPredicted RBP16.24■□□□□ 0.19
COL27A1-201ENST00000356083 NRMQ8IXM6 262 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 TUBA1CQ9BQE3 449 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 BARX1Q9HBU1 254 aaPredicted RBP16.24■□□□□ 0.19
COL27A1-201ENST00000356083 HHATLQ9HCP6 504 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 PLSCR3Q9NRY6 295 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 TMEM248Q9NWD8 314 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 A0A1W2PS29 197 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 RDH16O75452 317 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 MVKQ03426 396 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 CCNJQ5T5M9 372 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 COMMD7Q86VX2 200 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 CLEC4DQ8WXI8 215 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 BRI3BPQ8WY22 251 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 IER3IP1Q9Y5U9 82 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 SNRNP70P08621 437 aaKnown RBP16.24■□□□□ 0.19
COL27A1-201ENST00000356083 SPOCK1Q08629 439 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 ALG8Q9BVK2 526 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 ARMC1Q9NVT9 282 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 PAQR5Q9NXK6 330 aaPredicted RBP16.24■□□□□ 0.19
COL27A1-201ENST00000356083 SLC9B1P1A6NJY1 282 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 PHYHO14832 338 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 TPOP07202 933 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 HNRNPA2B1P22626 353 aaKnown RBP16.24■□□□□ 0.19
COL27A1-201ENST00000356083 P2RY2P41231 377 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 COQ5Q5HYK3 327 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 COX15Q7KZN9 410 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 HSD17B6O14756 317 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 PRAMEF4O60810 478 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 HAPLN1P10915 354 aaPredicted RBP16.24■□□□□ 0.19
COL27A1-201ENST00000356083 TLDC1Q6P9B6 456 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 CCDC71Q8IV32 467 aaPredicted RBP16.24■□□□□ 0.19
COL27A1-201ENST00000356083 ASB11Q8WXH4 323 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 MUS81Q96NY9 551 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 NICN1Q9BSH3 213 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 INIPQ9NRY2 104 aa16.24■□□□□ 0.19
COL27A1-201ENST00000356083 OR6C65A6NJZ3 312 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 B3GALNT1O75752 331 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 CLDN1O95832 211 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 OR5W2Q8NH69 310 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 SLC6A5Q9Y345 797 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 CACNA1GO43497 2377 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 FOXN2P32314 431 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 FAM189BP81408 668 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 RNLSQ5VYX0 342 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 ATG9BQ674R7 924 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 OSGIN2Q9Y236 505 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 A0A0A6YYC8 382 aaPredicted RBP16.23■□□□□ 0.19
COL27A1-201ENST00000356083 OR52A4PA6NMU1 304 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 I3L1I5 382 aaPredicted RBP16.23■□□□□ 0.19
COL27A1-201ENST00000356083 NUPL2O15504 423 aaKnown RBP16.23■□□□□ 0.19
COL27A1-201ENST00000356083 NXPH2O95156 264 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 CTRB1P17538 263 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 CYCSP99999 105 aaKnown RBP16.23■□□□□ 0.19
COL27A1-201ENST00000356083 ARL6IP1Q15041 203 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 CTRB2Q6GPI1 263 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 OR52E8Q6IFG1 317 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 DBX2Q6ZNG2 339 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 DUSP23Q9BVJ7 150 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 CACNG6Q9BXT2 260 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 GOLT1BQ9Y3E0 138 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 DEPDC5O75140 1603 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 ROBO3Q96MS0 1386 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 EMC10Q5UCC4 262 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 C11orf42Q8N5U0 333 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 NT5C3BQ969T7 300 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 ULBP2Q9BZM5 246 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 NLKQ9UBE8 527 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 NOSIPQ9Y314 301 aaKnown RBP16.23■□□□□ 0.19
COL27A1-201ENST00000356083 MSTNO14793 375 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 CD63P08962 238 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 SERTAD2Q14140 314 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 RAB35Q15286 201 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 OSBPL7Q9BZF2 842 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 NMNAT2Q9BZQ4 307 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 OR1D4P47884 311 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 DIO3P55073 304 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 MGAT3Q09327 533 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 ATP6AP1Q15904 470 aa16.23■□□□□ 0.19
COL27A1-201ENST00000356083 PLD6Q8N2A8 252 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms