RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 ZNF367Q7RTV3 350 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 LNX2Q8N448 690 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 ZNF582Q96NG8 517 aaPredicted RBP15.79■□□□□ 0.12
VPS13B-201ENST00000355155 LMF1Q96S06 567 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 ADAM19Q9H013 955 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 APMAPQ9HDC9 416 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 C19orf25Q9UFG5 118 aaPredicted RBP15.79■□□□□ 0.12
VPS13B-201ENST00000355155 A8MUA0 341 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 NTN1O95631 604 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 TSPAN19P0C672 248 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 PNMTP11086 282 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 DBTP11182 482 aaKnown RBP15.79■□□□□ 0.12
VPS13B-201ENST00000355155 CD59P13987 128 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 LIMK1P53667 647 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 EMP2P54851 167 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 EFR3AQ14156 821 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 PHF19Q5T6S3 580 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 CPEB2Q7Z5Q1 589 aaKnown RBP15.79■□□□□ 0.12
VPS13B-201ENST00000355155 ATG4DQ86TL0 474 aaPredicted RBP15.79■□□□□ 0.12
VPS13B-201ENST00000355155 MISPQ8IVT2 679 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 C3orf49Q96BT1 292 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 ARSGQ96EG1 525 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 TEX12Q9BXU0 123 aa15.79■□□□□ 0.12
VPS13B-201ENST00000355155 LNP1A1A4G5 178 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 PRODHO43272 600 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 ZNF264O43296 627 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 PPM1BO75688 479 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 NADKO95544 446 aaPredicted RBP15.78■□□□□ 0.12
VPS13B-201ENST00000355155 CD63P08962 238 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 ZNF806P0C7X5 589 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 TGFBR2P37173 567 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 CD226Q15762 336 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 ISXQ2M1V0 245 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 ALG10BQ5I7T1 473 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 FAM198BQ6UWH4 519 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 APOOLQ6UXV4 268 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 CDK20Q8IZL9 346 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 TCEANCQ8N8B7 351 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 PFN4Q8NHR9 129 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 NMD3Q96D46 503 aaKnown RBP15.78■□□□□ 0.12
VPS13B-201ENST00000355155 BPIFA2Q96DR5 249 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 OMA1Q96E52 524 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 ZPBPQ9BS86 351 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 LSM2Q9Y333 95 aaKnown RBP15.78■□□□□ 0.12
VPS13B-201ENST00000355155 DNAH14Q0VDD8 3507 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 ST3GAL4Q11206 333 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 GPR107Q5VW38 600 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 HLA-DQA1Q5Y7H0 255 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 OR2T33Q8NG76 320 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 EFHD2Q96C19 240 aaPredicted RBP15.78■□□□□ 0.12
VPS13B-201ENST00000355155 FUNDC2Q9BWH2 189 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 TSSK6Q9BXA6 273 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 C20orf141Q9NUB4 165 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 TBC1D23Q9NUY8 699 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 GPR83Q9NYM4 423 aa15.78■□□□□ 0.12
VPS13B-201ENST00000355155 DIMT1Q9UNQ2 313 aaKnown RBP15.78■□□□□ 0.12
VPS13B-201ENST00000355155 TMEM200CA6NKL6 621 aa15.77■□□□□ 0.12
VPS13B-201ENST00000355155 CDX4O14627 284 aaPredicted RBP15.77■□□□□ 0.12
VPS13B-201ENST00000355155 HCN1O60741 890 aa15.77■□□□□ 0.12
VPS13B-201ENST00000355155 ABCD3P28288 659 aa15.77■□□□□ 0.12
VPS13B-201ENST00000355155 MAP2K4P45985 399 aa15.77■□□□□ 0.12
VPS13B-201ENST00000355155 GPR4P46093 362 aa15.77■□□□□ 0.12
VPS13B-201ENST00000355155 ZNF91Q05481 1191 aa15.77■□□□□ 0.12
VPS13B-201ENST00000355155 ANKDD1AQ495B1 522 aa15.77■□□□□ 0.12
VPS13B-201ENST00000355155 LCN10Q6JVE6 187 aa15.77■□□□□ 0.12
VPS13B-201ENST00000355155 CYP4Z2PQ8N1L4 340 aa15.77■□□□□ 0.12
VPS13B-201ENST00000355155 IQCF1Q8N6M8 205 aa15.77■□□□□ 0.12
VPS13B-201ENST00000355155 OR52D1Q9H346 318 aa15.77■□□□□ 0.12
VPS13B-201ENST00000355155 TVP23BQ9NYZ1 205 aa15.77■□□□□ 0.12
VPS13B-201ENST00000355155 SNTNA6NMZ2 147 aa15.77■□□□□ 0.11
VPS13B-201ENST00000355155 RFPL3O75679 317 aa15.77■□□□□ 0.11
VPS13B-201ENST00000355155 DKK1O94907 266 aa15.77■□□□□ 0.11
VPS13B-201ENST00000355155 IFI30P13284 250 aa15.77■□□□□ 0.11
VPS13B-201ENST00000355155 E2F1Q01094 437 aa15.77■□□□□ 0.11
VPS13B-201ENST00000355155 ARMC4Q5T2S8 1044 aa15.77■□□□□ 0.11
VPS13B-201ENST00000355155 SLC15A4Q8N697 577 aa15.77■□□□□ 0.11
VPS13B-201ENST00000355155 HGDQ93099 445 aa15.77■□□□□ 0.11
VPS13B-201ENST00000355155 NTNG2Q96CW9 530 aa15.77■□□□□ 0.11
VPS13B-201ENST00000355155 TMEM80Q96HE8 168 aa15.77■□□□□ 0.11
VPS13B-201ENST00000355155 GPX7Q96SL4 187 aaPredicted RBP15.77■□□□□ 0.11
VPS13B-201ENST00000355155 UBQLN3Q9H347 655 aa15.77■□□□□ 0.11
VPS13B-201ENST00000355155 EXOGQ9Y2C4 368 aaKnown RBP15.77■□□□□ 0.11
VPS13B-201ENST00000355155 KNL1Q8NG31 2342 aa15.77■□□□□ 0.11
VPS13B-201ENST00000355155 STSP08842 583 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 ADORA3P0DMS8 318 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 PAX7P23759 505 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 PCSK6P29122 969 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 ST13P50502 369 aaKnown RBP15.76■□□□□ 0.11
VPS13B-201ENST00000355155 RAB15P59190 212 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 RAB40BQ12829 278 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 CTF1Q16619 201 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 SMARCD3Q6STE5 483 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 ARMC10Q8N2F6 343 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 METTL21AQ8WXB1 218 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 FAM117AQ9C073 453 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 HHATLQ9HCP6 504 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 ISYNA1Q9NPH2 558 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 M0R082 166 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 M0R129 80 aa15.76■□□□□ 0.11
VPS13B-201ENST00000355155 ICOSLGO75144 302 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms