RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 NOTCH2Q04721 2471 aa16.92■□□□□ 0.3
VPS72-201ENST00000354473 A0A1W2PP18 115 aa16.92■□□□□ 0.3
VPS72-201ENST00000354473 EEF1E1-BLOC1S5C9J1V9 151 aa16.92■□□□□ 0.3
VPS72-201ENST00000354473 EEF1E1O43324 174 aaKnown RBP16.92■□□□□ 0.3
VPS72-201ENST00000354473 IL18BPO95998 194 aa16.92■□□□□ 0.3
VPS72-201ENST00000354473 PRF1P14222 555 aa16.92■□□□□ 0.3
VPS72-201ENST00000354473 IGFBP2P18065 325 aa16.92■□□□□ 0.3
VPS72-201ENST00000354473 ADH6P28332 368 aa16.92■□□□□ 0.3
VPS72-201ENST00000354473 SFTPDP35247 375 aa16.92■□□□□ 0.3
VPS72-201ENST00000354473 EIF1AXP47813 144 aaKnown RBP16.92■□□□□ 0.3
VPS72-201ENST00000354473 ASCL1P50553 236 aa16.92■□□□□ 0.3
VPS72-201ENST00000354473 KCNJ10P78508 379 aa16.92■□□□□ 0.3
VPS72-201ENST00000354473 PON3Q15166 354 aa16.92■□□□□ 0.3
VPS72-201ENST00000354473 SGCBQ16585 318 aa16.92■□□□□ 0.3
VPS72-201ENST00000354473 CTU2Q2VPK5 515 aaKnown RBP16.92■□□□□ 0.3
VPS72-201ENST00000354473 METTL21CQ5VZV1 264 aa16.92■□□□□ 0.3
VPS72-201ENST00000354473 CGB2Q6NT52 195 aa16.92■□□□□ 0.3
VPS72-201ENST00000354473 MCEMP1Q8IX19 187 aa16.92■□□□□ 0.3
VPS72-201ENST00000354473 LILRA2Q8N149 483 aa16.92■□□□□ 0.3
VPS72-201ENST00000354473 OR10D3Q8NH80 312 aa16.92■□□□□ 0.3
VPS72-201ENST00000354473 FNDC9Q8TBE3 224 aa16.92■□□□□ 0.3
VPS72-201ENST00000354473 SLC38A5Q8WUX1 472 aa16.92■□□□□ 0.3
VPS72-201ENST00000354473 WDR60Q8WVS4 1066 aa16.92■□□□□ 0.3
VPS72-201ENST00000354473 MRGPRX4Q96LA9 322 aa16.92■□□□□ 0.3
VPS72-201ENST00000354473 SFXN3Q9BWM7 321 aa16.92■□□□□ 0.3
VPS72-201ENST00000354473 CCDC134Q9H6E4 229 aa16.92■□□□□ 0.3
VPS72-201ENST00000354473 MTHFD2LQ9H903 347 aaPredicted RBP16.92■□□□□ 0.3
VPS72-201ENST00000354473 THUMPD1Q9NXG2 353 aaKnown RBP16.92■□□□□ 0.3
VPS72-201ENST00000354473 CALML5Q9NZT1 146 aa16.92■□□□□ 0.3
VPS72-201ENST00000354473 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.91■□□□□ 0.3
VPS72-201ENST00000354473 TMEM247A6NEH6 219 aa16.91■□□□□ 0.3
VPS72-201ENST00000354473 TNFSF11O14788 317 aa16.91■□□□□ 0.3
VPS72-201ENST00000354473 EFNA2O43921 213 aa16.91■□□□□ 0.3
VPS72-201ENST00000354473 DNAJA2O60884 412 aa16.91■□□□□ 0.3
VPS72-201ENST00000354473 NTN1O95631 604 aa16.91■□□□□ 0.3
VPS72-201ENST00000354473 NUDT7P0C024 238 aa16.91■□□□□ 0.3
VPS72-201ENST00000354473 TFPTP0C1Z6 253 aa16.91■□□□□ 0.3
VPS72-201ENST00000354473 PGCP20142 388 aa16.91■□□□□ 0.3
VPS72-201ENST00000354473 RPS4Y1P22090 263 aaKnown RBP16.91■□□□□ 0.3
VPS72-201ENST00000354473 SHC1P29353 583 aa16.91■□□□□ 0.3
VPS72-201ENST00000354473 MDH1P40925 334 aaKnown RBP16.91■□□□□ 0.3
VPS72-201ENST00000354473 ARFIP2P53365 341 aa16.91■□□□□ 0.3
VPS72-201ENST00000354473 CRISP3P54108 245 aa16.91■□□□□ 0.3
VPS72-201ENST00000354473 PLAURQ03405 335 aa16.91■□□□□ 0.3
VPS72-201ENST00000354473 FADDQ13158 208 aa16.91■□□□□ 0.3
VPS72-201ENST00000354473 RPS26P11Q5JNZ5 115 aaPredicted RBP16.91■□□□□ 0.3
VPS72-201ENST00000354473 PPP4R4Q6NUP7 873 aa16.91■□□□□ 0.3
VPS72-201ENST00000354473 ESPNLQ6ZVH7 1005 aa16.91■□□□□ 0.3
VPS72-201ENST00000354473 OR2V1Q8NHB1 315 aa16.91■□□□□ 0.3
VPS72-201ENST00000354473 ST8SIA1Q92185 356 aa16.91■□□□□ 0.3
VPS72-201ENST00000354473 PMM1Q92871 262 aa16.91■□□□□ 0.3
VPS72-201ENST00000354473 ADGRG7Q96K78 797 aa16.91■□□□□ 0.3
VPS72-201ENST00000354473 KLHL15Q96M94 604 aa16.91■□□□□ 0.3
VPS72-201ENST00000354473 TREX2Q9BQ50 279 aaPredicted RBP16.91■□□□□ 0.3
VPS72-201ENST00000354473 TRIM8Q9BZR9 551 aa16.91■□□□□ 0.3
VPS72-201ENST00000354473 VAPAQ9P0L0 249 aa16.91■□□□□ 0.3
VPS72-201ENST00000354473 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.91■□□□□ 0.3
VPS72-201ENST00000354473 ITPR2Q14571 2701 aa16.9■□□□□ 0.3
VPS72-201ENST00000354473 DSPPQ9NZW4 1301 aa16.9■□□□□ 0.3
VPS72-201ENST00000354473 TRBV5-3A0A0A0MS03 114 aa16.9■□□□□ 0.3
VPS72-201ENST00000354473 A0A0J9YW62 118 aa16.9■□□□□ 0.3
VPS72-201ENST00000354473 A0A1W2PNV4 684 aa16.9■□□□□ 0.3
VPS72-201ENST00000354473 ETV2O00321 342 aaPredicted RBP16.9■□□□□ 0.3
VPS72-201ENST00000354473 ADAMDEC1O15204 470 aa16.9■□□□□ 0.3
VPS72-201ENST00000354473 CXCL13O43927 109 aa16.9■□□□□ 0.3
VPS72-201ENST00000354473 DBIP07108 87 aaKnown RBP16.9■□□□□ 0.3
VPS72-201ENST00000354473 FCGR2AP12318 317 aa16.9■□□□□ 0.3
VPS72-201ENST00000354473 IL7RP16871 459 aa16.9■□□□□ 0.3
VPS72-201ENST00000354473 UQCRC1P31930 480 aa16.9■□□□□ 0.3
VPS72-201ENST00000354473 RYKP34925 604 aa16.9■□□□□ 0.3
VPS72-201ENST00000354473 GNA13Q14344 377 aa16.9■□□□□ 0.3
VPS72-201ENST00000354473 SLC25A53Q5H9E4 307 aa16.9■□□□□ 0.3
VPS72-201ENST00000354473 HBMQ6B0K9 141 aa16.9■□□□□ 0.3
VPS72-201ENST00000354473 OR2A2Q6IF42 318 aa16.9■□□□□ 0.3
VPS72-201ENST00000354473 DMRTC2Q8IXT2 367 aaPredicted RBP16.9■□□□□ 0.3
VPS72-201ENST00000354473 CMIPQ8IY22 773 aa16.9■□□□□ 0.3
VPS72-201ENST00000354473 PEX5LQ8IYB4 626 aa16.9■□□□□ 0.3
VPS72-201ENST00000354473 ATP6V1C2Q8NEY4 427 aa16.9■□□□□ 0.3
VPS72-201ENST00000354473 CNOT9Q92600 299 aaKnown RBP16.9■□□□□ 0.3
VPS72-201ENST00000354473 MAL2Q969L2 176 aa16.9■□□□□ 0.3
VPS72-201ENST00000354473 TMEM19Q96HH6 336 aa16.9■□□□□ 0.3
VPS72-201ENST00000354473 A4GALTQ9NPC4 353 aa16.9■□□□□ 0.3
VPS72-201ENST00000354473 EXOSC3Q9NQT5 275 aaKnown RBP16.9■□□□□ 0.3
VPS72-201ENST00000354473 LEF1Q9UJU2 399 aaPredicted RBP16.9■□□□□ 0.3
VPS72-201ENST00000354473 GJE1A6NN92 205 aa16.89■□□□□ 0.29
VPS72-201ENST00000354473 ANGPT2O15123 496 aa16.89■□□□□ 0.29
VPS72-201ENST00000354473 BMP2P12643 396 aa16.89■□□□□ 0.29
VPS72-201ENST00000354473 NID1P14543 1247 aa16.89■□□□□ 0.29
VPS72-201ENST00000354473 PPIBP23284 216 aaKnown RBP16.89■□□□□ 0.29
VPS72-201ENST00000354473 DLX5P56178 289 aa16.89■□□□□ 0.29
VPS72-201ENST00000354473 SESN3P58005 492 aa16.89■□□□□ 0.29
VPS72-201ENST00000354473 SELENBP1Q13228 472 aa16.89■□□□□ 0.29
VPS72-201ENST00000354473 PDSS1Q5T2R2 415 aa16.89■□□□□ 0.29
VPS72-201ENST00000354473 MRPL2Q5T653 305 aaKnown RBP16.89■□□□□ 0.29
VPS72-201ENST00000354473 OR52P1PQ8NH57 321 aa16.89■□□□□ 0.29
VPS72-201ENST00000354473 ZNF563Q8TA94 476 aa16.89■□□□□ 0.29
VPS72-201ENST00000354473 TMEM234Q8WY98 164 aa16.89■□□□□ 0.29
VPS72-201ENST00000354473 LRRC46Q96FV0 321 aa16.89■□□□□ 0.29
VPS72-201ENST00000354473 PRRG4Q9BZD6 226 aa16.89■□□□□ 0.29
VPS72-201ENST00000354473 IKZF5Q9H5V7 419 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms