RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 PAQR5Q9NXK6 330 aaPredicted RBP14.27□□□□□ -0.13
MRPL55-202ENST00000336300 PRDM4Q9UKN5 801 aa14.27□□□□□ -0.13
MRPL55-202ENST00000336300 DSPPQ9NZW4 1301 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 A1L4Q6 167 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 SHISA8B8ZZ34 492 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 OIP5O43482 229 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 SERPINB7O75635 380 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 CLDN14O95500 239 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 RNF224P0DH78 156 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 RPS4Y1P22090 263 aaKnown RBP14.26□□□□□ -0.13
MRPL55-202ENST00000336300 RYKP34925 604 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 MTPNP58546 118 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 SCARB2Q14108 478 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 CAPRIN1Q14444 709 aaKnown RBP14.26□□□□□ -0.13
MRPL55-202ENST00000336300 MAPK11Q15759 364 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 ZNF311Q5JNZ3 666 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 MRPL2Q5T653 305 aaKnown RBP14.26□□□□□ -0.13
MRPL55-202ENST00000336300 NANOGP8Q6NSW7 305 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 NCCRP1Q6ZVX7 275 aaPredicted RBP14.26□□□□□ -0.13
MRPL55-202ENST00000336300 MAMDC2Q7Z304 686 aaPredicted RBP14.26□□□□□ -0.13
MRPL55-202ENST00000336300 P4HA3Q7Z4N8 544 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 SERPINA11Q86U17 422 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 SLC30A8Q8IWU4 369 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 RPRMLQ8N4K4 120 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 HIPK4Q8NE63 616 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 FAM71CQ8NEG0 241 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 BHLHE22Q8NFJ8 381 aaPredicted RBP14.26□□□□□ -0.13
MRPL55-202ENST00000336300 OR8J3Q8NGG0 315 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 TM9SF2Q99805 663 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 TUBA1CQ9BQE3 449 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 CCDC106Q9BWC9 280 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 SPATA9Q9BWV2 254 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 NANOGQ9H9S0 305 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 EFCAB1Q9HAE3 211 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 TIGARQ9NQ88 270 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 RNF6Q9Y252 685 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 ANGPT4Q9Y264 503 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 ZNF443Q9Y2A4 671 aaPredicted RBP14.26□□□□□ -0.13
MRPL55-202ENST00000336300 ARL2BPQ9Y2Y0 163 aa14.26□□□□□ -0.13
MRPL55-202ENST00000336300 PRORSD1PA6NEY8 169 aa14.25□□□□□ -0.13
MRPL55-202ENST00000336300 CFAP73A6NFT4 308 aa14.25□□□□□ -0.13
MRPL55-202ENST00000336300 CLDN24A6NM45 220 aa14.25□□□□□ -0.13
MRPL55-202ENST00000336300 CLCA1A8K7I4 914 aa14.25□□□□□ -0.13
MRPL55-202ENST00000336300 EIF1AYO14602 144 aaKnown RBP14.25□□□□□ -0.13
MRPL55-202ENST00000336300 COX4I1P13073 169 aa14.25□□□□□ -0.13
MRPL55-202ENST00000336300 GP1BBP13224 206 aa14.25□□□□□ -0.13
MRPL55-202ENST00000336300 PRKCAP17252 672 aa14.25□□□□□ -0.13
MRPL55-202ENST00000336300 FKBP2P26885 142 aaKnown RBP14.25□□□□□ -0.13
MRPL55-202ENST00000336300 COPZ1P61923 177 aa14.25□□□□□ -0.13
MRPL55-202ENST00000336300 FOXF1Q12946 379 aa14.25□□□□□ -0.13
MRPL55-202ENST00000336300 TOMM34Q15785 309 aaPredicted RBP14.25□□□□□ -0.13
MRPL55-202ENST00000336300 RPS26P11Q5JNZ5 115 aaPredicted RBP14.25□□□□□ -0.13
MRPL55-202ENST00000336300 RNF220Q5VTB9 566 aa14.25□□□□□ -0.13
MRPL55-202ENST00000336300 ESPNLQ6ZVH7 1005 aa14.25□□□□□ -0.13
MRPL55-202ENST00000336300 ZNF550Q7Z398 422 aa14.25□□□□□ -0.13
MRPL55-202ENST00000336300 VRK2Q86Y07 508 aa14.25□□□□□ -0.13
MRPL55-202ENST00000336300 GRAMD2AQ8IUY3 354 aa14.25□□□□□ -0.13
MRPL55-202ENST00000336300 LILRA2Q8N149 483 aa14.25□□□□□ -0.13
MRPL55-202ENST00000336300 CNOT9Q92600 299 aaKnown RBP14.25□□□□□ -0.13
MRPL55-202ENST00000336300 WNT2BQ93097 391 aa14.25□□□□□ -0.13
MRPL55-202ENST00000336300 ZFP3Q96NJ6 502 aa14.25□□□□□ -0.13
MRPL55-202ENST00000336300 UCN2Q96RP3 112 aa14.25□□□□□ -0.13
MRPL55-202ENST00000336300 IKZF5Q9H5V7 419 aa14.25□□□□□ -0.13
MRPL55-202ENST00000336300 KAT8Q9H7Z6 458 aaKnown RBP14.25□□□□□ -0.13
MRPL55-202ENST00000336300 ACER3Q9NUN7 267 aa14.25□□□□□ -0.13
MRPL55-202ENST00000336300 PLEKHB1Q9UF11 243 aaPredicted RBP14.25□□□□□ -0.13
MRPL55-202ENST00000336300 SLC13A4Q9UKG4 626 aa14.25□□□□□ -0.13
MRPL55-202ENST00000336300 AP3M1Q9Y2T2 418 aa14.25□□□□□ -0.13
MRPL55-202ENST00000336300 KLF2Q9Y5W3 355 aaPredicted RBP14.25□□□□□ -0.13
MRPL55-202ENST00000336300 SPIN1Q9Y657 262 aaPredicted RBP14.25□□□□□ -0.13
MRPL55-202ENST00000336300 CDHR4A6H8M9 788 aa14.24□□□□□ -0.13
MRPL55-202ENST00000336300 MBD3L4A6NDZ8 208 aaPredicted RBP14.24□□□□□ -0.13
MRPL55-202ENST00000336300 MBD3L3A6NE82 208 aaPredicted RBP14.24□□□□□ -0.13
MRPL55-202ENST00000336300 MBD3L5A6NJ08 208 aaPredicted RBP14.24□□□□□ -0.13
MRPL55-202ENST00000336300 DNAJA2O60884 412 aa14.24□□□□□ -0.13
MRPL55-202ENST00000336300 DCTN3O75935 186 aa14.24□□□□□ -0.13
MRPL55-202ENST00000336300 PABPC4LP0CB38 370 aaKnown RBP14.24□□□□□ -0.13
MRPL55-202ENST00000336300 PSMA4P25789 261 aaKnown RBP14.24□□□□□ -0.13
MRPL55-202ENST00000336300 APOBEC1P41238 236 aaKnown RBP14.24□□□□□ -0.13
MRPL55-202ENST00000336300 HTR3AP46098 478 aa14.24□□□□□ -0.13
MRPL55-202ENST00000336300 EIF1AXP47813 144 aaKnown RBP14.24□□□□□ -0.13
MRPL55-202ENST00000336300 IDH2P48735 452 aaKnown RBP14.24□□□□□ -0.13
MRPL55-202ENST00000336300 SUCLG1P53597 346 aaKnown RBP14.24□□□□□ -0.13
MRPL55-202ENST00000336300 CLDN15P56746 228 aa14.24□□□□□ -0.13
MRPL55-202ENST00000336300 CLDN20P56880 219 aa14.24□□□□□ -0.13
MRPL55-202ENST00000336300 SESN3P58005 492 aa14.24□□□□□ -0.13
MRPL55-202ENST00000336300 EEF1A1P68104 462 aaKnown RBP14.24□□□□□ -0.13
MRPL55-202ENST00000336300 MERTKQ12866 999 aa14.24□□□□□ -0.13
MRPL55-202ENST00000336300 SELENBP1Q13228 472 aa14.24□□□□□ -0.13
MRPL55-202ENST00000336300 SLC25A53Q5H9E4 307 aa14.24□□□□□ -0.13
MRPL55-202ENST00000336300 INTS11Q5TA45 600 aaKnown RBP14.24□□□□□ -0.13
MRPL55-202ENST00000336300 EEF1A1P5Q5VTE0 462 aa14.24□□□□□ -0.13
MRPL55-202ENST00000336300 OR2A2Q6IF42 318 aa14.24□□□□□ -0.13
MRPL55-202ENST00000336300 ZNF836Q6ZNA1 936 aa14.24□□□□□ -0.13
MRPL55-202ENST00000336300 PIGWQ7Z7B1 504 aa14.24□□□□□ -0.13
MRPL55-202ENST00000336300 POU5F2Q8N7G0 328 aa14.24□□□□□ -0.13
MRPL55-202ENST00000336300 OR10A6Q8NH74 314 aa14.24□□□□□ -0.13
MRPL55-202ENST00000336300 LILRB4Q8NHJ6 448 aa14.24□□□□□ -0.13
MRPL55-202ENST00000336300 MBD3L2Q8NHZ7 208 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms