RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-201ENST00000327154 GJE1A6NN92 205 aa12.59□□□□□ -0.39
RPAIN-201ENST00000327154 HMGB1P1B2RPK0 211 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-201ENST00000327154 NTN1O95631 604 aa12.59□□□□□ -0.39
RPAIN-201ENST00000327154 NID1P14543 1247 aa12.59□□□□□ -0.39
RPAIN-201ENST00000327154 PRKCAP17252 672 aa12.59□□□□□ -0.39
RPAIN-201ENST00000327154 MATN1P21941 496 aa12.59□□□□□ -0.39
RPAIN-201ENST00000327154 ELK4P28324 431 aa12.59□□□□□ -0.39
RPAIN-201ENST00000327154 C21orf58P58505 322 aa12.59□□□□□ -0.39
RPAIN-201ENST00000327154 GPR68Q15743 365 aa12.59□□□□□ -0.39
RPAIN-201ENST00000327154 PDCD2Q16342 344 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-201ENST00000327154 ZNF239Q16600 458 aaKnown RBP12.59□□□□□ -0.39
RPAIN-201ENST00000327154 BEX5Q5H9J7 111 aa12.59□□□□□ -0.39
RPAIN-201ENST00000327154 TMEM201Q5SNT2 666 aa12.59□□□□□ -0.39
RPAIN-201ENST00000327154 OR4F3Q6IEY1 312 aa12.59□□□□□ -0.39
RPAIN-201ENST00000327154 ALKBH2Q6NS38 261 aa12.59□□□□□ -0.39
RPAIN-201ENST00000327154 C20orf204Q6ZNR8 217 aa12.59□□□□□ -0.39
RPAIN-201ENST00000327154 NUFIP2Q7Z417 695 aaKnown RBP12.59□□□□□ -0.39
RPAIN-201ENST00000327154 WFDC8Q8IUA0 241 aa12.59□□□□□ -0.39
RPAIN-201ENST00000327154 TUSC5Q8IXB3 177 aa12.59□□□□□ -0.39
RPAIN-201ENST00000327154 TMCO5AQ8N6Q1 288 aa12.59□□□□□ -0.39
RPAIN-201ENST00000327154 OR5W2Q8NH69 310 aa12.59□□□□□ -0.39
RPAIN-201ENST00000327154 RNF128Q8TEB7 428 aa12.59□□□□□ -0.39
RPAIN-201ENST00000327154 CPNE4Q96A23 557 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-201ENST00000327154 PERPQ96FX8 193 aa12.59□□□□□ -0.39
RPAIN-201ENST00000327154 SORT1Q99523 831 aa12.59□□□□□ -0.39
RPAIN-201ENST00000327154 SERHL2Q9H4I8 314 aa12.59□□□□□ -0.39
RPAIN-201ENST00000327154 AKTIPQ9H8T0 292 aa12.59□□□□□ -0.39
RPAIN-201ENST00000327154 VPS13CQ709C8 3753 aa12.58□□□□□ -0.39
RPAIN-201ENST00000327154 SERINC4A6NH21 518 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 DUXAA6NLW8 204 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 ZNF264O43296 627 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 EIF4E2O60573 245 aaKnown RBP12.58□□□□□ -0.4
RPAIN-201ENST00000327154 FCMRO60667 390 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 CYP7B1O75881 506 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 PRKD3O94806 890 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 PLAUP00749 431 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 UBL4AP11441 157 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 ENPP1P22413 925 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 RPL14P50914 215 aaKnown RBP12.58□□□□□ -0.4
RPAIN-201ENST00000327154 CCR4P51679 360 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 CASP9P55211 416 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 LTBQ06643 244 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 QPRTQ15274 297 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 RNPS1Q15287 305 aaKnown RBP12.58□□□□□ -0.4
RPAIN-201ENST00000327154 SMU1Q2TAY7 513 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 PDZK1Q5T2W1 519 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 ATG16L1Q676U5 607 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 CLEC9AQ6UXN8 241 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 PLEKHM3Q6ZWE6 761 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 FCRLAQ7L513 359 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 OLIG3Q7RTU3 272 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 TOR1AIP2Q8NFQ8 470 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 ARSGQ96EG1 525 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 PLPPR2Q96GM1 343 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 MRGPRX4Q96LA9 322 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 ZNF446Q9NWS9 450 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 ASIC5Q9NY37 505 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 KCNE5Q9UJ90 142 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 PCDHGB4Q9UN71 923 aa12.58□□□□□ -0.4
RPAIN-201ENST00000327154 IGHV3-15A0A0B4J1V0 119 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 RNF103-CHMP3A0A140T963 221 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 A0A1W2PNR3 127 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 RNASET2O00584 256 aaKnown RBP12.57□□□□□ -0.4
RPAIN-201ENST00000327154 STX11O75558 287 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 SNUPNO95149 360 aaKnown RBP12.57□□□□□ -0.4
RPAIN-201ENST00000327154 YES1P07947 543 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 PSMB1P20618 241 aaKnown RBP12.57□□□□□ -0.4
RPAIN-201ENST00000327154 SLC7A1P30825 629 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 NR1H2P55055 460 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 CBFBQ13951 182 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 TSC22D1Q15714 1073 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 ARHGAP11BQ3KRB8 267 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 SLC25A53Q5H9E4 307 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 PRSS57Q6UWY2 283 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 ZNF704Q6ZNC4 412 aaPredicted RBP12.57□□□□□ -0.4
RPAIN-201ENST00000327154 YTHDF3Q7Z739 585 aaKnown RBP12.57□□□□□ -0.4
RPAIN-201ENST00000327154 ANKRD46Q86W74 232 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 KIRREL3Q8IZU9 778 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 CIARTQ8N365 385 aaPredicted RBP12.57□□□□□ -0.4
RPAIN-201ENST00000327154 OR4A15Q8NGL6 344 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 RAB3IL1Q8TBN0 382 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 ZFP90Q8TF47 636 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 S100PBPQ96BU1 408 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 Q96MF0 132 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 THUMPD3Q9BV44 507 aaKnown RBP12.57□□□□□ -0.4
RPAIN-201ENST00000327154 HDHD5Q9BXW7 423 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 DPY30Q9C005 99 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 NMUR2Q9GZQ4 415 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 OR10A4Q9H209 315 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 MANSC1Q9H8J5 431 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 COQ10BQ9H8M1 238 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 PNPOQ9NVS9 261 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 KLHL13Q9P2N7 655 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 MKLN1Q9UL63 735 aa12.57□□□□□ -0.4
RPAIN-201ENST00000327154 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.57□□□□□ -0.4
RPAIN-201ENST00000327154 CENPVL1A0A0U1RR11 272 aa12.56□□□□□ -0.4
RPAIN-201ENST00000327154 PRSS51A0A1B0GVH4 220 aa12.56□□□□□ -0.4
RPAIN-201ENST00000327154 H7C1Q1 480 aa12.56□□□□□ -0.4
RPAIN-201ENST00000327154 SCN2BO60939 215 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms