RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 TRNT1Q96Q11 434 aaKnown RBP10.71□□□□□ -0.7
CLN6-217ENST00000636964 ADAP2Q9NPF8 381 aa10.71□□□□□ -0.7
CLN6-217ENST00000636964 SOHLH2Q9NX45 425 aa10.71□□□□□ -0.7
CLN6-217ENST00000636964 IGHV5-51A0A0C4DH38 117 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 TRBV4-1A0A0J9YWV2 114 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 CYR61O00622 381 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 BCAT2O15382 392 aaPredicted RBP10.7□□□□□ -0.7
CLN6-217ENST00000636964 FRS3O43559 492 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 NOS1APO75052 506 aaPredicted RBP10.7□□□□□ -0.7
CLN6-217ENST00000636964 YES1P07947 543 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 RHCEP18577 417 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 NT5EP21589 574 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 SOX18P35713 384 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 CAPZBP47756 277 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 AP2S1P53680 142 aaPredicted RBP10.7□□□□□ -0.7
CLN6-217ENST00000636964 UGT2B15P54855 530 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 HOXC5Q00444 222 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 KEAP1Q14145 624 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 TOR2AQ5JU69 321 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 IQCHQ86VS3 1027 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 KRT73Q86Y46 540 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 ENTHD1Q8IYW4 607 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 ADAMTS15Q8TE58 950 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 ZNF354BQ96LW1 612 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 NMNAT1Q9HAN9 279 aaPredicted RBP10.7□□□□□ -0.7
CLN6-217ENST00000636964 AMBNQ9NP70 447 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 MS4A12Q9NXJ0 267 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 MKLN1Q9UL63 735 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 GRIP1Q9Y3R0 1128 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 DMDP11532 3685 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 UNC13CQ8NB66 2214 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 LINC00587B1AMM8 73 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 LMO7DNF2Z398 122 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 BET1O15155 118 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 RNF144AP50876 292 aaPredicted RBP10.7□□□□□ -0.7
CLN6-217ENST00000636964 AKR1D1P51857 326 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 KCNAB1Q14722 419 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 EXOSC7Q15024 291 aaKnown RBP10.7□□□□□ -0.7
CLN6-217ENST00000636964 ZMYND11Q15326 602 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 TIGD6Q17RP2 521 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 AMZ1Q400G9 498 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 AARDQ4LEZ3 155 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 CCNJQ5T5M9 372 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 PAMR1Q6UXH9 720 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 PLEKHM3Q6ZWE6 761 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 C16orf62Q7Z3J2 963 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 VRK2Q86Y07 508 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 CDS1Q92903 461 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 C12orf57Q99622 126 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 EML5Q05BV3 1969 aa10.7□□□□□ -0.7
CLN6-217ENST00000636964 RHPN2P1A8MT19 583 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 CHST10O43529 356 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 DPM1O60762 260 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 PIAS2O75928 621 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 EPPINO95925 133 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 APOA1P02647 267 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 TNFSF8P32971 234 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 MAN2A2P49641 1150 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 DEFA1P59665 94 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 DEFA3P59666 94 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 MLIPQ5VWP3 458 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 ARSKQ6UWY0 536 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 USP53Q70EK8 1073 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 ZFAND1Q8TCF1 268 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 ACTRT3Q9BYD9 372 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 LYRM4Q9HD34 91 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 SCN3BQ9NY72 215 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 TAS2R16Q9NYV7 291 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 LRIT1Q9P2V4 623 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 SPACA6W5XKT8 324 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 A8MUA0 341 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 LOC110117498-PIK3R3F6TDL0 507 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 PIP5K1CO60331 668 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 GASTP01350 101 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 TGM4P49221 684 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 PDX1P52945 283 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 OR1D5P58170 312 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 DGAT2L6Q6ZPD8 337 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 ZNF605Q86T29 641 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 RAB43Q86YS6 212 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 AMER2Q8N7J2 671 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 AQP11Q8NBQ7 271 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 ASB15Q8WXK1 588 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 MOAP1Q96BY2 351 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 PEX11GQ96HA9 241 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 CHCHD6Q9BRQ6 235 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 BARHL1Q9BZE3 327 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 SLC38A1Q9H2H9 487 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 LUZP4Q9P127 313 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 RNF215Q9Y6U7 377 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 SMLR1H3BR10 107 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 M0R129 80 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 CCNB2O95067 398 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 ZIC2O95409 532 aaPredicted RBP10.69□□□□□ -0.7
CLN6-217ENST00000636964 PTHP01270 115 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 CT62P0C5K7 136 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 ANXA11P50995 505 aaKnown RBP10.69□□□□□ -0.7
CLN6-217ENST00000636964 SEC23BQ15437 767 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 MFSD12Q6NUT3 480 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 RHOUQ7L0Q8 258 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms