RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 GASTP01350 101 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 LINGO3P0C6S8 592 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 UBTFL6P0CB48 400 aaPredicted RBP6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 GKN3PP0CG01 181 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 PRG2P13727 222 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 HTR2AP28223 471 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 OTX2P32243 289 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 EVI2BP34910 448 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 DLSTP36957 453 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 RBM34P42696 430 aaKnown RBP6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 ACAA2P42765 397 aaKnown RBP6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 NOVA1P51513 510 aaKnown RBP6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 COPZ1P61923 177 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 GABREP78334 506 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 PLAURQ03405 335 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 SKP2Q13309 424 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 SEC23BQ15437 767 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 FAM69BQ5VUD6 431 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 ANKRD34AQ69YU3 496 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 C1orf94Q6P1W5 598 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 PGBD2Q6P3X8 592 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 ULK3Q6PHR2 472 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 IGF2-ASQ6U949 168 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 UGT2A3Q6UWM9 527 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 MBOAT2Q6ZWT7 520 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 NUP54Q7Z3B4 507 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 PPP1R32Q7Z5V6 425 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 THAP5Q7Z6K1 395 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 TSPYL5Q86VY4 417 aaPredicted RBP6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 RAB43Q86YS6 212 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 APLFQ8IW19 511 aaPredicted RBP6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 DND1Q8IYX4 353 aaKnown RBP6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 OR4K5Q8NGD3 323 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 PIGXQ8TBF5 258 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 PHOSPHO1Q8TCT1 267 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 GNPDA2Q8TDQ7 276 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 DNAJA4Q8WW22 397 aaPredicted RBP6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 ADAMTS14Q8WXS8 1223 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 TTC9Q92623 222 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 GATA6Q92908 595 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 GTPBP3Q969Y2 492 aaKnown RBP6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 MPP4Q96JB8 637 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 IP6K3Q96PC2 410 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 CCNL2Q96S94 520 aaPredicted RBP6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 PITX2Q99697 317 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 APOL4Q9BPW4 351 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 NIPSNAP1Q9BPW8 284 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 MESP1Q9BRJ9 268 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 PRR14Q9BWN1 585 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 YTHDF1Q9BYJ9 559 aaKnown RBP6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 LAT2Q9GZY6 243 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 CTPS2Q9NRF8 586 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 UBAP1Q9NZ09 502 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 NDRG4Q9ULP0 352 aaKnown RBP6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 PCDHGA6Q9Y5G7 932 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 GMPPBQ9Y5P6 360 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 HSPE1-MOB4S4R3N1 261 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 GOLGA4Q13439 2230 aaKnown RBP6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 VPS13AQ96RL7 3174 aa6.92□□□□□ -1.3
PTP4A1-206ENST00000627002 A0A0B4J2E0 115 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 A0A1B0GWA3 101 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 A0A1B0GX12 115 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 HTR3EA5X5Y0 456 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 E9PQ18 207 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 TERTO14746 1132 aaKnown RBP6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 FADS1O60427 444 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 BCAS1O75363 584 aaPredicted RBP6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 OR2J2O76002 312 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 LYNP07948 512 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 GNAO1P09471 354 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 FBXO45P0C2W1 286 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 OSMP13725 252 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 POU2F1P14859 743 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 FUT4P22083 530 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 RYKP34925 604 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 RNF144AP50876 292 aaPredicted RBP6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 NUP107P57740 925 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 RPS18P62269 152 aaKnown RBP6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 RPP38P78345 283 aaKnown RBP6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 ALDH6A1Q02252 535 aaKnown RBP6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 FOXD4Q12950 439 aaPredicted RBP6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 TSPAN31Q12999 210 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 CD226Q15762 336 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 ZNF691Q5VV52 312 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 WBP2NLQ6ICG8 309 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 TTC33Q6PID6 262 aaPredicted RBP6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 KLHL17Q6TDP4 642 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 OPN5Q6U736 354 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 TMPRSS7Q7RTY8 843 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 NKAIN4Q8IVV8 208 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 CDK20Q8IZL9 346 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 ARMC10Q8N2F6 343 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 TMCO5AQ8N6Q1 288 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 POGLUT1Q8NBL1 392 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 THAP3Q8WTV1 239 aaPredicted RBP6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 TMEM239Q8WW34 195 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 HGDQ93099 445 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 KIAA1143Q96AT1 154 aaPredicted RBP6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 MUS81Q96NY9 551 aa6.91□□□□□ -1.3
PTP4A1-206ENST00000627002 ING2Q9H160 280 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms