RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 CLDN12P56749 244 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 ILF3Q12906 894 aaKnown RBP eCLIP11.48□□□□□ -0.579e-9■■■■□ 24.9
MATR3-227ENST00000618441 OR7A5Q15622 319 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 PRRT3Q5FWE3 981 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 FAM76BQ5HYJ3 339 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 FCRLBQ6BAA4 426 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 ACSM5Q6NUN0 579 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 NOXRED1Q6NXP6 359 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 NXPE4Q6UWF7 544 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 CXXC5Q7LFL8 322 aaKnown RBP11.48□□□□□ -0.57
MATR3-227ENST00000618441 OR4D9Q8NGE8 314 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 SLC22A18Q96BI1 424 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 SLC6A18Q96N87 628 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 KLK11Q9UBX7 282 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 PISDQ9UG56 409 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 AK6Q9Y3D8 172 aaKnown RBP11.48□□□□□ -0.57
MATR3-227ENST00000618441 CCDC88CQ9P219 2028 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 ACOD1A6NK06 481 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 ANHXE9PGG2 379 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 NEDD8-MDP1E9PL57 170 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 KCNAB3O43448 404 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 SLC25A27O95847 323 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 MRPL3P09001 348 aaKnown RBP11.48□□□□□ -0.57
MATR3-227ENST00000618441 HOXB8P17481 243 aaPredicted RBP11.48□□□□□ -0.57
MATR3-227ENST00000618441 SDHAP31040 664 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 TRA2BP62995 288 aaKnown RBP11.48□□□□□ -0.57
MATR3-227ENST00000618441 LSM11P83369 360 aaKnown RBP eCLIP11.48□□□□□ -0.57
MATR3-227ENST00000618441 RGNQ15493 299 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 TTLL9Q3SXZ7 439 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 OLFML2AQ68BL7 652 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 CDPF1Q6NVV7 123 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 IQCHQ86VS3 1027 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 DNAAF1Q8NEP3 725 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 OR52E4Q8NGH9 312 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 OR6K2Q8NGY2 324 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 C1orf216Q8TAB5 229 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 GNPDA2Q8TDQ7 276 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 RAB8BQ92930 207 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 GPR20Q99678 358 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 TOLLIPQ9H0E2 274 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 FZD8Q9H461 694 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 FBRSQ9HAH7 460 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 VSX1Q9NZR4 365 aaPredicted RBP11.48□□□□□ -0.57
MATR3-227ENST00000618441 STOX2Q9P2F5 926 aaPredicted RBP11.48□□□□□ -0.57
MATR3-227ENST00000618441 DNAJB11Q9UBS4 358 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 KCNK7Q9Y2U2 307 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 PCDHB11Q9Y5F2 797 aa11.48□□□□□ -0.57
MATR3-227ENST00000618441 CNMDO75829 334 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 ABCD3P28288 659 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 EIF2S3P41091 472 aaKnown RBP11.47□□□□□ -0.57
MATR3-227ENST00000618441 ART1P52961 327 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 SEMG2Q02383 582 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 TMEM44Q2T9K0 475 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 NDUFAF6Q330K2 333 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 SYT14P1Q58G82 188 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 ADGRF1Q5T601 910 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 KLHL36Q8N4N3 616 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 GEMIN6Q8WXD5 167 aaKnown RBP11.47□□□□□ -0.57
MATR3-227ENST00000618441 FZD3Q9NPG1 666 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 TAS2R10Q9NYW0 307 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 PCDHB9Q9Y5E1 797 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 FOCADQ5VW36 1801 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 HTTP42858 3142 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 MEX3AA1L020 520 aaKnown RBP11.47□□□□□ -0.57
MATR3-227ENST00000618441 MYBPHLA2RUH7 354 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 VEGFDO43915 354 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 RAB3DO95716 219 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 LGALS2P05162 132 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 CSN2P05814 226 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 PRPS2P11908 318 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 HSD3B1P14060 373 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 ARF5P84085 180 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 PCGF3Q3KNV8 242 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 SFXN4Q6P4A7 337 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 FBXO46Q6PJ61 603 aaPredicted RBP11.47□□□□□ -0.57
MATR3-227ENST00000618441 MYLIPQ8WY64 445 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 RAB7BQ96AH8 199 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 ORAI1Q96D31 301 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 DNAJA3Q96EY1 480 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 PPP1R16AQ96I34 528 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 ZNF582Q96NG8 517 aaPredicted RBP11.47□□□□□ -0.57
MATR3-227ENST00000618441 CLCC1Q96S66 551 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 SLC35A5Q9BS91 424 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 GGACTQ9BVM4 153 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 NCOR1P1Q9H4R4 102 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 EGLN3Q9H6Z9 239 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 CYSLTR2Q9NS75 346 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 MCM3APO60318 1980 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 A0A087X0M5 115 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 TRBV5-3A0A0A0MS03 114 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 A0A1B0GX30 115 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 A6NLC8 198 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 SLC31A2O15432 143 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 CIDEAO60543 219 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 ZNF8P17098 575 aaPredicted RBP11.47□□□□□ -0.57
MATR3-227ENST00000618441 AQP2P41181 271 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 SRSF3P84103 164 aaKnown RBP11.47□□□□□ -0.57
MATR3-227ENST00000618441 ERV3-1Q14264 604 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 SLC22A10Q63ZE4 541 aa11.47□□□□□ -0.57
MATR3-227ENST00000618441 ZNF227Q86WZ6 799 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms