RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 ENPP6Q6UWR7 440 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 RANBP3LQ86VV4 465 aaPredicted RBP13.39□□□□□ -0.27
CD48-203ENST00000613788 CARM1Q86X55 608 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 FADS6Q8N9I5 356 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 TEX19Q8NA77 164 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 ZFP62Q8NB50 900 aaPredicted RBP13.39□□□□□ -0.27
CD48-203ENST00000613788 OR2M3Q8NG83 312 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 PNPLA2Q96AD5 504 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 ARSGQ96EG1 525 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 GNRHR2Q96P88 292 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 V9GYQ6 96 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 TCRBV3S1A0A5B6 114 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 DHRS12A0PJE2 317 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 PINLYPA6NC86 204 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 ANKUB1A6NFN9 424 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 FAM47E-STBD1D6RA91 191 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 AP3D1O14617 1153 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 OIP5O43482 229 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 GPIP06744 558 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 GKN3PP0CG01 181 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 PSMA4P25789 261 aaKnown RBP13.39□□□□□ -0.27
CD48-203ENST00000613788 RYKP34925 604 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 OR1E2P47887 323 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 DSCR4P56555 118 aaPredicted RBP13.39□□□□□ -0.27
CD48-203ENST00000613788 ACTR3P61158 418 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 COPZ1P61923 177 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 PLAURQ03405 335 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 CHRNB3Q05901 458 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 EPS8Q12929 822 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 INAQ16352 499 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 HYAL4Q2M3T9 481 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 PLEKHN1Q494U1 663 aaPredicted RBP13.39□□□□□ -0.27
CD48-203ENST00000613788 COMTD1Q86VU5 262 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 FAM86B1Q8N7N1 296 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 VANGL1Q8TAA9 524 aaPredicted RBP13.39□□□□□ -0.27
CD48-203ENST00000613788 RSRC1Q96IZ7 334 aaKnown RBP13.39□□□□□ -0.27
CD48-203ENST00000613788 SEPHS2Q99611 448 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 MAGIXQ9H6Y5 334 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 ANAPC2Q9UJX6 822 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 C15orf41Q9Y2V0 281 aa13.39□□□□□ -0.27
CD48-203ENST00000613788 CNTRLQ7Z7A1 2325 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 LRRC3CA6NJW4 275 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 C17orf51A8MQB3 221 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 M0R3H8 397 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 ACOT7O00154 380 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 FAAHO00519 579 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 FRS3O43559 492 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 GMFGO60234 142 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 FMO6PO60774 539 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 IFNW1P05000 195 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 ITGA2P17301 1181 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 TNFRSF1BP20333 461 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 ACAA2P42765 397 aaKnown RBP13.38□□□□□ -0.27
CD48-203ENST00000613788 ZNF41P51814 821 aaPredicted RBP13.38□□□□□ -0.27
CD48-203ENST00000613788 PPIAP62937 165 aaKnown RBP13.38□□□□□ -0.27
CD48-203ENST00000613788 CCNIQ14094 377 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 GANABQ14697 944 aaKnown RBP13.38□□□□□ -0.27
CD48-203ENST00000613788 KPNB1Q14974 876 aaKnown RBP13.38□□□□□ -0.27
CD48-203ENST00000613788 NADK2Q4G0N4 442 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 SLC22A16Q86VW1 577 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 OR6T1Q8NGN1 323 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 ZNF563Q8TA94 476 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 GPR119Q8TDV5 335 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 CANT1Q8WVQ1 401 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 TMEM234Q8WY98 164 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 SLC47A1Q96FL8 570 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 ZNF559Q9BR84 538 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 TTTY12Q9BZ98 90 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 TRIM2Q9C040 744 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 QPCTLQ9NXS2 382 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 TESQ9UGI8 421 aaKnown RBP13.38□□□□□ -0.27
CD48-203ENST00000613788 FBXL2Q9UKC9 423 aa13.38□□□□□ -0.27
CD48-203ENST00000613788 MRPS18CQ9Y3D5 142 aaKnown RBP13.38□□□□□ -0.27
CD48-203ENST00000613788 TNRC6AQ8NDV7 1962 aaKnown RBP13.37□□□□□ -0.27
CD48-203ENST00000613788 DSPP15924 2871 aaKnown RBP13.37□□□□□ -0.27
CD48-203ENST00000613788 A0A087WZY1 265 aa13.37□□□□□ -0.27
CD48-203ENST00000613788 GLSO94925 669 aaPredicted RBP13.37□□□□□ -0.27
CD48-203ENST00000613788 RAP2AP10114 183 aa13.37□□□□□ -0.27
CD48-203ENST00000613788 PRG2P13727 222 aa13.37□□□□□ -0.27
CD48-203ENST00000613788 DPP4P27487 766 aa13.37□□□□□ -0.27
CD48-203ENST00000613788 GDF1P27539 372 aa13.37□□□□□ -0.27
CD48-203ENST00000613788 IFNA8P32881 189 aa13.37□□□□□ -0.27
CD48-203ENST00000613788 ZNF136P52737 540 aa13.37□□□□□ -0.27
CD48-203ENST00000613788 KLRB1Q12918 225 aa13.37□□□□□ -0.27
CD48-203ENST00000613788 TOMM20Q15388 145 aa13.37□□□□□ -0.27
CD48-203ENST00000613788 LACC1Q8IV20 430 aa13.37□□□□□ -0.27
CD48-203ENST00000613788 ADGRG5Q8IZF4 528 aa13.37□□□□□ -0.27
CD48-203ENST00000613788 OR4D11Q8NGI4 311 aa13.37□□□□□ -0.27
CD48-203ENST00000613788 C1GALT1C1Q96EU7 318 aa13.37□□□□□ -0.27
CD48-203ENST00000613788 MCHR1Q99705 422 aa13.37□□□□□ -0.27
CD48-203ENST00000613788 WFDC6Q9BQY6 131 aa13.37□□□□□ -0.27
CD48-203ENST00000613788 POLR2J2Q9GZM3 115 aaKnown RBP13.37□□□□□ -0.27
CD48-203ENST00000613788 POLR2J3Q9H1A7 115 aaKnown RBP13.37□□□□□ -0.27
CD48-203ENST00000613788 DENND2DQ9H6A0 471 aaPredicted RBP13.37□□□□□ -0.27
CD48-203ENST00000613788 TMEM27Q9HBJ8 222 aa13.37□□□□□ -0.27
CD48-203ENST00000613788 IL1RAPQ9NPH3 570 aa13.37□□□□□ -0.27
CD48-203ENST00000613788 DKKL1Q9UK85 242 aa13.37□□□□□ -0.27
CD48-203ENST00000613788 LHX6Q9UPM6 363 aa13.37□□□□□ -0.27
CD48-203ENST00000613788 AURKCQ9UQB9 309 aa13.37□□□□□ -0.27
CD48-203ENST00000613788 FAM32AQ9Y421 112 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms