RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 TMEM19Q96HH6 336 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 ANKRD27Q96NW4 1050 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 TREX2Q9BQ50 279 aaPredicted RBP16.37■□□□□ 0.21
IRF3-216ENST00000597180 BCL2L10Q9HD36 194 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.37■□□□□ 0.21
IRF3-216ENST00000597180 ALKBH4Q9NXW9 302 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 ZNF337Q9Y3M9 751 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 MED12LQ86YW9 2145 aa16.37■□□□□ 0.21
IRF3-216ENST00000597180 A0A0G2JPF8 293 aa16.36■□□□□ 0.21
IRF3-216ENST00000597180 HNRNPCL2B2RXH8 293 aa16.36■□□□□ 0.21
IRF3-216ENST00000597180 HNRNPCL3B7ZW38 293 aa16.36■□□□□ 0.21
IRF3-216ENST00000597180 HNRNPCL1O60812 293 aaKnown RBP16.36■□□□□ 0.21
IRF3-216ENST00000597180 DBIP07108 87 aaKnown RBP16.36■□□□□ 0.21
IRF3-216ENST00000597180 HNRNPCL4P0DMR1 293 aa16.36■□□□□ 0.21
IRF3-216ENST00000597180 ARAFP10398 606 aa16.36■□□□□ 0.21
IRF3-216ENST00000597180 NUP107P57740 925 aa16.36■□□□□ 0.21
IRF3-216ENST00000597180 PLAURQ03405 335 aa16.36■□□□□ 0.21
IRF3-216ENST00000597180 TRMT5Q32P41 509 aaKnown RBP16.36■□□□□ 0.21
IRF3-216ENST00000597180 GCNT6Q5T4J0 391 aa16.36■□□□□ 0.21
IRF3-216ENST00000597180 XKRXQ6PP77 449 aa16.36■□□□□ 0.21
IRF3-216ENST00000597180 CPLX4Q7Z7G2 160 aa16.36■□□□□ 0.21
IRF3-216ENST00000597180 HMGN2P46Q86SG4 172 aa16.36■□□□□ 0.21
IRF3-216ENST00000597180 MRGPRGQ86SM5 289 aa16.36■□□□□ 0.21
IRF3-216ENST00000597180 SNX32Q86XE0 403 aa16.36■□□□□ 0.21
IRF3-216ENST00000597180 PEX5LQ8IYB4 626 aa16.36■□□□□ 0.21
IRF3-216ENST00000597180 METTL25Q8N6Q8 603 aa16.36■□□□□ 0.21
IRF3-216ENST00000597180 POC1BQ8TC44 478 aa16.36■□□□□ 0.21
IRF3-216ENST00000597180 WDR60Q8WVS4 1066 aa16.36■□□□□ 0.21
IRF3-216ENST00000597180 MAL2Q969L2 176 aa16.36■□□□□ 0.21
IRF3-216ENST00000597180 NPAS1Q99742 590 aa16.36■□□□□ 0.21
IRF3-216ENST00000597180 FAM107BQ9H098 131 aa16.36■□□□□ 0.21
IRF3-216ENST00000597180 TMEM38AQ9H6F2 299 aa16.36■□□□□ 0.21
IRF3-216ENST00000597180 EXOSC3Q9NQT5 275 aaKnown RBP16.36■□□□□ 0.21
IRF3-216ENST00000597180 ARMCX1Q9P291 453 aa16.36■□□□□ 0.21
IRF3-216ENST00000597180 AP4B1Q9Y6B7 739 aa16.36■□□□□ 0.21
IRF3-216ENST00000597180 CD8B2A6NJW9 211 aa16.35■□□□□ 0.21
IRF3-216ENST00000597180 SHISA8B8ZZ34 492 aa16.35■□□□□ 0.21
IRF3-216ENST00000597180 ETV2O00321 342 aaPredicted RBP16.35■□□□□ 0.21
IRF3-216ENST00000597180 BCAS1O75363 584 aaPredicted RBP16.35■□□□□ 0.21
IRF3-216ENST00000597180 NUDT14O95848 222 aa16.35■□□□□ 0.21
IRF3-216ENST00000597180 EPPINO95925 133 aa16.35■□□□□ 0.21
IRF3-216ENST00000597180 NPPAP01160 153 aa16.35■□□□□ 0.21
IRF3-216ENST00000597180 UBTFL6P0CB48 400 aaPredicted RBP16.35■□□□□ 0.21
IRF3-216ENST00000597180 NID1P14543 1247 aa16.35■□□□□ 0.21
IRF3-216ENST00000597180 POU3F2P20265 443 aaPredicted RBP16.35■□□□□ 0.21
IRF3-216ENST00000597180 EIF1P41567 113 aaKnown RBP16.35■□□□□ 0.21
IRF3-216ENST00000597180 PMPCAQ10713 525 aa16.35■□□□□ 0.21
IRF3-216ENST00000597180 CBFBQ13951 182 aa16.35■□□□□ 0.21
IRF3-216ENST00000597180 RPS26P11Q5JNZ5 115 aaPredicted RBP16.35■□□□□ 0.21
IRF3-216ENST00000597180 NSUN5P2Q63ZY6 315 aa16.35■□□□□ 0.21
IRF3-216ENST00000597180 REP15Q6BDI9 236 aa16.35■□□□□ 0.21
IRF3-216ENST00000597180 SEM1Q6ZVN7 128 aa16.35■□□□□ 0.21
IRF3-216ENST00000597180 ADGRE4PQ86SQ3 457 aa16.35■□□□□ 0.21
IRF3-216ENST00000597180 LACC1Q8IV20 430 aa16.35■□□□□ 0.21
IRF3-216ENST00000597180 TMCO5AQ8N6Q1 288 aa16.35■□□□□ 0.21
IRF3-216ENST00000597180 RND1Q92730 232 aa16.35■□□□□ 0.21
IRF3-216ENST00000597180 RNF145Q96MT1 663 aa16.35■□□□□ 0.21
IRF3-216ENST00000597180 UCN2Q96RP3 112 aa16.35■□□□□ 0.21
IRF3-216ENST00000597180 TUBA1CQ9BQE3 449 aa16.35■□□□□ 0.21
IRF3-216ENST00000597180 GPC6Q9Y625 555 aaPredicted RBP16.35■□□□□ 0.21
IRF3-216ENST00000597180 COL12A1Q99715 3063 aa16.35■□□□□ 0.21
IRF3-216ENST00000597180 INTS1Q8N201 2190 aaKnown RBP16.34■□□□□ 0.21
IRF3-216ENST00000597180 CLDN24A6NM45 220 aa16.34■□□□□ 0.21
IRF3-216ENST00000597180 H0Y3Z8 333 aa16.34■□□□□ 0.21
IRF3-216ENST00000597180 H3BML4 177 aa16.34■□□□□ 0.21
IRF3-216ENST00000597180 FXYD1O00168 92 aa16.34■□□□□ 0.21
IRF3-216ENST00000597180 MRASO14807 208 aa16.34■□□□□ 0.21
IRF3-216ENST00000597180 NTN1O95631 604 aa16.34■□□□□ 0.21
IRF3-216ENST00000597180 CLDN1O95832 211 aa16.34■□□□□ 0.21
IRF3-216ENST00000597180 THBS1P07996 1170 aa16.34■□□□□ 0.21
IRF3-216ENST00000597180 IL7RP16871 459 aa16.34■□□□□ 0.21
IRF3-216ENST00000597180 PRKCAP17252 672 aa16.34■□□□□ 0.21
IRF3-216ENST00000597180 ADH6P28332 368 aa16.34■□□□□ 0.21
IRF3-216ENST00000597180 SRYQ05066 204 aa16.34■□□□□ 0.21
IRF3-216ENST00000597180 CYLC2Q14093 348 aaPredicted RBP16.34■□□□□ 0.21
IRF3-216ENST00000597180 SELPLGQ14242 412 aa16.34■□□□□ 0.21
IRF3-216ENST00000597180 TOMM34Q15785 309 aaPredicted RBP16.34■□□□□ 0.21
IRF3-216ENST00000597180 ADRM1Q16186 407 aa16.34■□□□□ 0.21
IRF3-216ENST00000597180 SLC25A53Q5H9E4 307 aa16.34■□□□□ 0.21
IRF3-216ENST00000597180 RIPPLY2Q5TAB7 128 aa16.34■□□□□ 0.21
IRF3-216ENST00000597180 MTDHQ86UE4 582 aaKnown RBP16.34■□□□□ 0.21
IRF3-216ENST00000597180 OR52P1PQ8NH57 321 aa16.34■□□□□ 0.21
IRF3-216ENST00000597180 BBS10Q8TAM1 723 aa16.34■□□□□ 0.21
IRF3-216ENST00000597180 ZNF524Q96C55 264 aa16.34■□□□□ 0.21
IRF3-216ENST00000597180 THUMPD3Q9BV44 507 aaKnown RBP16.34■□□□□ 0.21
IRF3-216ENST00000597180 CCDC106Q9BWC9 280 aa16.34■□□□□ 0.21
IRF3-216ENST00000597180 MYLK2Q9H1R3 596 aa16.34■□□□□ 0.21
IRF3-216ENST00000597180 CALHM2Q9HA72 323 aa16.34■□□□□ 0.21
IRF3-216ENST00000597180 HCFC1P51610 2035 aa16.33■□□□□ 0.21
IRF3-216ENST00000597180 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.33■□□□□ 0.2
IRF3-216ENST00000597180 LOC100653049A0A140TA62 436 aa16.33■□□□□ 0.2
IRF3-216ENST00000597180 KDM4EB2RXH2 506 aaPredicted RBP16.33■□□□□ 0.2
IRF3-216ENST00000597180 KRT34O76011 436 aa16.33■□□□□ 0.2
IRF3-216ENST00000597180 PGM3O95394 542 aa16.33■□□□□ 0.2
IRF3-216ENST00000597180 ETS2P15036 469 aa16.33■□□□□ 0.2
IRF3-216ENST00000597180 ELK4P28324 431 aa16.33■□□□□ 0.2
IRF3-216ENST00000597180 TIMP3P35625 211 aa16.33■□□□□ 0.2
IRF3-216ENST00000597180 CCR4P51679 360 aa16.33■□□□□ 0.2
IRF3-216ENST00000597180 SUCLG1P53597 346 aaKnown RBP16.33■□□□□ 0.2
IRF3-216ENST00000597180 DLX5P56178 289 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms