RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 CYB5AP00167 134 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 KLKB1P03952 638 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 TP53P04637 393 aaPredicted RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 ATP1B1P05026 303 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 PCCBP05166 539 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 HMGN2P05204 90 aaKnown RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 HNRNPA1P09651 372 aaKnown RBP eCLIP3.31□□□□□ -1.88
VMP1-216ENST00000592790 RAB3AP20336 220 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 EPHA2P29317 976 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 SSTR4P31391 388 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 S100A11P31949 105 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 GPR4P46093 362 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 ARL4DP49703 201 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 FBXW4P57775 412 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 RPS26P62854 115 aaKnown RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 MC1RQ01726 317 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 SEMG2Q02383 582 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 RELQ04864 619 aaPredicted RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 PDCD11Q14690 1871 aaKnown RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 GRIN2CQ14957 1233 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 LEXMQ3ZCV2 418 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 OR2G6Q5TZ20 316 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 ZNF613Q6PF04 617 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 KLHL24Q6TFL4 600 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 LYPD4Q6UWN0 246 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 RPTNQ6XPR3 784 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 LIPIQ6XZB0 460 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 HSD11B1LQ7Z5J1 315 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 ASPGQ86U10 573 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 ADGRG3Q86Y34 549 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 CCDC116Q8IYX3 515 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 ZFP41Q8N8Y5 198 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 TEX19Q8NA77 164 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 POGLUT1Q8NBL1 392 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 FAM71CQ8NEG0 241 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 OR6K6Q8NGW6 343 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 COQ8AQ8NI60 647 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 STOML3Q8TAV4 291 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 ABHD4Q8TB40 342 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 TM4SF18Q96CE8 201 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 LINC00615Q96LM1 132 aaPredicted RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 PRAP1Q96NZ9 151 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 SIGLEC11Q96RL6 698 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 KCNK17Q96T54 332 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 S100A13Q99584 98 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 YIPF4Q9BSR8 244 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 PAPPA2Q9BXP8 1791 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 SEMA4CQ9C0C4 833 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 OR52D1Q9H346 318 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 NOX3Q9HBY0 568 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 GALNT9Q9HCQ5 603 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 FZD3Q9NPG1 666 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 SLC6A13Q9NSD5 602 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 RXFP3Q9NSD7 469 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 MOKQ9UQ07 419 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 ZNF443Q9Y2A4 671 aaPredicted RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 EXOGQ9Y2C4 368 aaKnown RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 GPR52Q9Y2T5 361 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 RNF215Q9Y6U7 377 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 V9GY05 133 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 BRCA1P38398 1863 aaKnown RBP3.31□□□□□ -1.88
VMP1-216ENST00000592790 MYO16Q9Y6X6 1858 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 THSD7BQ9C0I4 1608 aa3.31□□□□□ -1.88
VMP1-216ENST00000592790 A0A0G2JMP0 313 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 A0A1W2PQ45 241 aaPredicted RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 A0A1W2PQY0 241 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 A0A1W2PRU2 124 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ANTXRLA6NF34 631 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 OR5K4A6NMS3 321 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 CTDSPLO15194 276 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 APODP05090 189 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 IL5P05113 134 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 SYPP08247 313 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 IFNGR1P15260 489 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 TIMP2P16035 220 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 GABRB1P18505 474 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ZP3P21754 424 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 PTPN6P29350 595 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 PRSS3P35030 304 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 TGFBR1P36897 503 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 DGKEP52429 567 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 RAB5BP61020 215 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 BTN3A2P78410 334 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 FLI1Q01543 452 aaPredicted RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 MEF2AQ02078 507 aaPredicted RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 MLLT1Q03111 559 aaPredicted RBP3.3□□□□□ -1.88
VMP1-216ENST00000592790 MADCAM1Q13477 382 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ENPP2Q13822 863 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ARL6IP1Q15041 203 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 PDGFRLQ15198 375 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 FAM209AQ5JX71 171 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ELFN2Q5R3F8 820 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 LAIR2Q6ISS4 152 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 ALKBH2Q6NS38 261 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 C19orf48Q6RUI8 117 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 TMEM107Q6UX40 140 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 NAXDQ8IW45 347 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 SLC35F2Q8IXU6 374 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 BEST3Q8N1M1 668 aa3.3□□□□□ -1.88
VMP1-216ENST00000592790 SVBPQ8N300 66 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms