RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 CHRAC1Q9NRG0 131 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 SLCO1C1Q9NYB5 712 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 TAS2R13Q9NYV9 303 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 CYTH4Q9UIA0 394 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 VWA8A3KMH1 1905 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 RALGAPA1Q6GYQ0 2036 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 FAM90A26D6RGX4 464 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 PRSS46E5RG02 174 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 GAPDHSO14556 408 aaPredicted RBP1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 CHEK1O14757 476 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 TO15178 435 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 INPP4BO15327 924 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 TBL1XO60907 577 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 SEMA4FO95754 770 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 AGTP01019 485 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 TFAP2AP05549 437 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 NGFRP08138 427 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 ACP1P24666 158 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 OR1E1P30953 314 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 CASQ1P31415 396 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 OPRD1P41143 372 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 OR3A3P47888 321 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 TTPAP49638 278 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 RGS4P49798 205 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 HNMTP50135 292 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 THOP1P52888 689 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 ARPP19P56211 112 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 CLDN17P56750 224 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 RHOAP61586 193 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 CDKL1Q00532 357 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 BNIP1Q12981 228 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 TAF1AQ15573 450 aaPredicted RBP1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 CST6Q15828 149 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 DECR1Q16698 335 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 SPANXN3Q5MJ09 141 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 KCNIP4Q6PIL6 250 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 ANGPTL8Q6UXH0 198 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 RNF165Q6ZSG1 346 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 Q6ZTC4 211 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 FAM183BPQ6ZVS7 135 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 PAQR9Q6ZVX9 377 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 ASRGL1Q7L266 308 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 PEX26Q7Z412 305 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 ADGRD2Q7Z7M1 963 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 SCD5Q86SK9 330 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 RTN4RL2Q86UN3 420 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 TAC4Q86UU9 113 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 MMD2Q8IY49 270 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 CCDC185Q8N715 623 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 BBS10Q8TAM1 723 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 ELMO2Q96JJ3 720 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF583Q96ND8 569 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 RNF157Q96PX1 679 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 ZBTB18Q99592 522 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 SPATA16Q9BXB7 569 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 PKIBQ9C010 78 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 VCX2Q9H322 139 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 GPR173Q9NS66 373 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 BFARQ9NZS9 450 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF319Q9P2F9 582 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 STUB1Q9UNE7 303 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 TCF19Q9Y242 345 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 AP3M1Q9Y2T2 418 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 CAB39Q9Y376 341 aaPredicted RBP1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 KLK4Q9Y5K2 254 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 TRBV5-3A0A0A0MS03 114 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 LY6G6EA0A0G2JKS1 128 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 A0A1B0GVT2 93 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 FAM230AA0A1W2PPH8 454 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 C5orf52A6NGY3 159 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 PGRMC1O00264 195 aaKnown RBP1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC28A1O00337 649 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 TIMM23O14925 209 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 TLX2O43763 284 aaPredicted RBP1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 NDUFS7O75251 213 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 CLN5O75503 358 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 PRKRAO75569 313 aaKnown RBP1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 HIST1H2AGP0C0S8 130 aaPredicted RBP1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 OR56A5P0C7T3 313 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 TRIM49P0CI25 452 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 TRIM49CP0CI26 452 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 TROVE2P10155 538 aaKnown RBP eCLIP1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 ICAM2P13598 275 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 UGT1A1P22309 533 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 PPP2R1BP30154 601 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 ARRB2P32121 409 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 ACAA2P42765 397 aaKnown RBP1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 CASP4P49662 377 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 CLDN20P56880 219 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 ACY1Q03154 408 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 CDH17Q12864 832 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 FAM182AQ5T1J6 154 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 KCTD8Q6ZWB6 473 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 PARGQ86W56 976 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 OOSP2Q86WS3 158 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 ELMOD2Q8IZ81 293 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 FBXW8Q8N3Y1 598 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 AADATQ8N5Z0 425 aa1.74□□□□□ -2.13
SMCHD1-211ENST00000584897 ACMSDQ8TDX5 336 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms