RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 SNX6Q9UNH7 406 aa12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 LOC390937A0A1W2PQ73 354 aa12.39□□□□□ -0.43
CSNK1D-224ENST00000584672 MANBAO00462 879 aa12.39□□□□□ -0.43
CSNK1D-224ENST00000584672 ZNF195O14628 629 aa12.39□□□□□ -0.43
CSNK1D-224ENST00000584672 OIP5O43482 229 aa12.39□□□□□ -0.43
CSNK1D-224ENST00000584672 APEX1P27695 318 aaKnown RBP12.39□□□□□ -0.43
CSNK1D-224ENST00000584672 APOBEC3AP31941 199 aaPredicted RBP12.39□□□□□ -0.43
CSNK1D-224ENST00000584672 COMPP49747 757 aaPredicted RBP12.39□□□□□ -0.43
CSNK1D-224ENST00000584672 FOXG1P55316 489 aaPredicted RBP12.39□□□□□ -0.43
CSNK1D-224ENST00000584672 C2orf80Q0P641 193 aa12.39□□□□□ -0.43
CSNK1D-224ENST00000584672 SLC29A2Q14542 456 aa12.39□□□□□ -0.43
CSNK1D-224ENST00000584672 UAP1Q16222 522 aaPredicted RBP12.39□□□□□ -0.43
CSNK1D-224ENST00000584672 MST1LQ2TV78 715 aa12.39□□□□□ -0.43
CSNK1D-224ENST00000584672 ARL13AQ5H913 290 aaPredicted RBP12.39□□□□□ -0.43
CSNK1D-224ENST00000584672 C9orf135Q5VTT2 229 aa12.39□□□□□ -0.43
CSNK1D-224ENST00000584672 METTL2BQ6P1Q9 378 aaKnown RBP12.39□□□□□ -0.43
CSNK1D-224ENST00000584672 THSD4Q6ZMP0 1018 aa12.39□□□□□ -0.43
CSNK1D-224ENST00000584672 SLC46A3Q7Z3Q1 461 aa12.39□□□□□ -0.43
CSNK1D-224ENST00000584672 SZRD1Q7Z422 152 aa12.39□□□□□ -0.43
CSNK1D-224ENST00000584672 OR2L13Q8N349 312 aa12.39□□□□□ -0.43
CSNK1D-224ENST00000584672 SLC43A2Q8N370 569 aa12.39□□□□□ -0.43
CSNK1D-224ENST00000584672 B4GALNT2Q8NHY0 566 aa12.39□□□□□ -0.43
CSNK1D-224ENST00000584672 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.39□□□□□ -0.436e-7■■■■■ 38
CSNK1D-224ENST00000584672 FBF1Q8TES7 1133 aa12.39□□□□□ -0.43
CSNK1D-224ENST00000584672 SNX18Q96RF0 628 aa12.39□□□□□ -0.43
CSNK1D-224ENST00000584672 ZNF225Q9UK10 706 aa12.39□□□□□ -0.43
CSNK1D-224ENST00000584672 GJE1A6NN92 205 aa12.38□□□□□ -0.43
CSNK1D-224ENST00000584672 RGS14O43566 566 aa12.38□□□□□ -0.43
CSNK1D-224ENST00000584672 OTCP00480 354 aa12.38□□□□□ -0.43
CSNK1D-224ENST00000584672 HPGDP15428 266 aa12.38□□□□□ -0.43
CSNK1D-224ENST00000584672 ELK4P28324 431 aa12.38□□□□□ -0.43
CSNK1D-224ENST00000584672 SLC7A1P30825 629 aa12.38□□□□□ -0.43
CSNK1D-224ENST00000584672 NTSP30990 170 aa12.38□□□□□ -0.43
CSNK1D-224ENST00000584672 TIA1P31483 386 aaKnown RBP eCLIP12.38□□□□□ -0.432e-6■□□□□ 9.2
CSNK1D-224ENST00000584672 HTR6P50406 440 aa12.38□□□□□ -0.43
CSNK1D-224ENST00000584672 PRKAG1P54619 331 aa12.38□□□□□ -0.43
CSNK1D-224ENST00000584672 PHC1P78364 1004 aa12.38□□□□□ -0.43
CSNK1D-224ENST00000584672 ZNF117Q03924 483 aa12.38□□□□□ -0.43
CSNK1D-224ENST00000584672 ACSM2AQ08AH3 577 aa12.38□□□□□ -0.43
CSNK1D-224ENST00000584672 CCNIQ14094 377 aa12.38□□□□□ -0.43
CSNK1D-224ENST00000584672 TRADDQ15628 312 aa12.38□□□□□ -0.43
CSNK1D-224ENST00000584672 TOMM34Q15785 309 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-224ENST00000584672 ACSM2BQ68CK6 577 aa12.38□□□□□ -0.43
CSNK1D-224ENST00000584672 GALNT5Q7Z7M9 940 aa12.38□□□□□ -0.43
CSNK1D-224ENST00000584672 GAS2L3Q86XJ1 694 aa12.38□□□□□ -0.43
CSNK1D-224ENST00000584672 LINC01356Q8N9X3 169 aa12.38□□□□□ -0.43
CSNK1D-224ENST00000584672 ZNF75CPQ92670 426 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-224ENST00000584672 ELP4Q96EB1 424 aa12.38□□□□□ -0.43
CSNK1D-224ENST00000584672 ACPTQ9BZG2 426 aa12.38□□□□□ -0.43
CSNK1D-224ENST00000584672 FKRPQ9H9S5 495 aa12.38□□□□□ -0.43
CSNK1D-224ENST00000584672 HMX2A2RU54 273 aa12.37□□□□□ -0.43
CSNK1D-224ENST00000584672 TMEM89A2RUT3 159 aa12.37□□□□□ -0.43
CSNK1D-224ENST00000584672 STX16-NPEPL1H3BU86 382 aa12.37□□□□□ -0.43
CSNK1D-224ENST00000584672 STX16O14662 325 aa12.37□□□□□ -0.43
CSNK1D-224ENST00000584672 SMIM24O75264 130 aa12.37□□□□□ -0.43
CSNK1D-224ENST00000584672 RPS17P08708 135 aaKnown RBP12.37□□□□□ -0.43
CSNK1D-224ENST00000584672 ANXA4P09525 319 aaPredicted RBP12.37□□□□□ -0.43
CSNK1D-224ENST00000584672 DDCP20711 480 aa12.37□□□□□ -0.43
CSNK1D-224ENST00000584672 TYK2P29597 1187 aa12.37□□□□□ -0.43
CSNK1D-224ENST00000584672 SNRPD2P62316 118 aaKnown RBP12.37□□□□□ -0.43
CSNK1D-224ENST00000584672 LGALS3BPQ08380 585 aa12.37□□□□□ -0.43
CSNK1D-224ENST00000584672 HSPB3Q12988 150 aa12.37□□□□□ -0.43
CSNK1D-224ENST00000584672 SWI5Q1ZZU3 235 aa12.37□□□□□ -0.43
CSNK1D-224ENST00000584672 NDUFAF6Q330K2 333 aa12.37□□□□□ -0.43
CSNK1D-224ENST00000584672 CCNJQ5T5M9 372 aa12.37□□□□□ -0.43
CSNK1D-224ENST00000584672 CBLN3Q6UW01 205 aa12.37□□□□□ -0.43
CSNK1D-224ENST00000584672 SSX8Q7RTT4 187 aa12.37□□□□□ -0.43
CSNK1D-224ENST00000584672 ZNF551Q7Z340 670 aaPredicted RBP12.37□□□□□ -0.43
CSNK1D-224ENST00000584672 PHOSPHO1Q8TCT1 267 aa12.37□□□□□ -0.43
CSNK1D-224ENST00000584672 ZNF483Q8TF39 744 aaPredicted RBP12.37□□□□□ -0.43
CSNK1D-224ENST00000584672 ZFAND2BQ8WV99 257 aa12.37□□□□□ -0.43
CSNK1D-224ENST00000584672 AMDHD1Q96NU7 426 aa12.37□□□□□ -0.43
CSNK1D-224ENST00000584672 MIEF1Q9NQG6 463 aa12.37□□□□□ -0.43
CSNK1D-224ENST00000584672 MOKQ9UQ07 419 aa12.37□□□□□ -0.43
CSNK1D-224ENST00000584672 A0A0A6YYJ9 748 aa12.36□□□□□ -0.43
CSNK1D-224ENST00000584672 CCDC189A1A4V9 331 aa12.36□□□□□ -0.43
CSNK1D-224ENST00000584672 FAM157AC9JC47 383 aa12.36□□□□□ -0.43
CSNK1D-224ENST00000584672 SLCO1B7G3V0H7 640 aa12.36□□□□□ -0.43
CSNK1D-224ENST00000584672 SCDO00767 359 aa12.36□□□□□ -0.43
CSNK1D-224ENST00000584672 CYTIPO60759 359 aa12.36□□□□□ -0.43
CSNK1D-224ENST00000584672 ACP2P11117 423 aa12.36□□□□□ -0.43
CSNK1D-224ENST00000584672 EIF1P41567 113 aaKnown RBP12.36□□□□□ -0.43
CSNK1D-224ENST00000584672 CHN2P52757 468 aa12.36□□□□□ -0.43
CSNK1D-224ENST00000584672 RAC3P60763 192 aa12.36□□□□□ -0.43
CSNK1D-224ENST00000584672 SLC25A3Q00325 362 aa12.36□□□□□ -0.43
CSNK1D-224ENST00000584672 TRIP10Q15642 601 aa12.36□□□□□ -0.43
CSNK1D-224ENST00000584672 GABRA6Q16445 453 aa12.36□□□□□ -0.43
CSNK1D-224ENST00000584672 FBXW9Q5XUX1 488 aa12.36□□□□□ -0.43
CSNK1D-224ENST00000584672 CYS1Q717R9 158 aa12.36□□□□□ -0.43
CSNK1D-224ENST00000584672 SPATA19Q7Z5L4 167 aa12.36□□□□□ -0.43
CSNK1D-224ENST00000584672 PEG10Q86TG7 708 aaKnown RBP12.36□□□□□ -0.43
CSNK1D-224ENST00000584672 MMGT1Q8N4V1 131 aa12.36□□□□□ -0.43
CSNK1D-224ENST00000584672 RFWD2Q8NHY2 731 aa12.36□□□□□ -0.43
CSNK1D-224ENST00000584672 ZNF524Q96C55 264 aa12.36□□□□□ -0.43
CSNK1D-224ENST00000584672 DNAJA3Q96EY1 480 aa12.36□□□□□ -0.43
CSNK1D-224ENST00000584672 OR5B2Q96R09 309 aa12.36□□□□□ -0.43
CSNK1D-224ENST00000584672 GIN1Q9NXP7 522 aa12.36□□□□□ -0.43
CSNK1D-224ENST00000584672 PCDHGB1Q9Y5G3 927 aa12.36□□□□□ -0.43
CSNK1D-224ENST00000584672 TMPRSS2O15393 492 aa12.35□□□□□ -0.43
CSNK1D-224ENST00000584672 LILRA1O75019 489 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms