RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 PIGUQ9H490 435 aa6.72□□□□□ -1.33
NUP88-205ENST00000572809 HHATLQ9HCP6 504 aa6.72□□□□□ -1.33
NUP88-205ENST00000572809 SIRT3Q9NTG7 399 aaPredicted RBP6.72□□□□□ -1.33
NUP88-205ENST00000572809 ZCCHC3Q9NUD5 404 aaKnown RBP6.72□□□□□ -1.33
NUP88-205ENST00000572809 GPATCH2Q9NW75 528 aa6.72□□□□□ -1.33
NUP88-205ENST00000572809 FBXO34Q9NWN3 711 aa6.72□□□□□ -1.33
NUP88-205ENST00000572809 GIN1Q9NXP7 522 aa6.72□□□□□ -1.33
NUP88-205ENST00000572809 KCNN3Q9UGI6 736 aa6.72□□□□□ -1.33
NUP88-205ENST00000572809 ZNF337Q9Y3M9 751 aa6.72□□□□□ -1.33
NUP88-205ENST00000572809 SNX8Q9Y5X2 465 aa6.72□□□□□ -1.33
NUP88-205ENST00000572809 CREBBPQ92793 2442 aa6.72□□□□□ -1.33
NUP88-205ENST00000572809 CLCA1A8K7I4 914 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 ALG1L2C9J202 215 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 GMFGO60234 142 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 ERLIN1O75477 346 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 SOX30O94993 753 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 C6orf47O95873 294 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 IL18BPO95998 194 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 TMIGD3P0DMS9 266 aaPredicted RBP6.71□□□□□ -1.34
NUP88-205ENST00000572809 HPGDP15428 266 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 BGNP21810 368 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 LCN1P31025 176 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 PEX19P40855 299 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 ECI1P42126 302 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 KIR2DL3P43628 341 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 ASCL1P50553 236 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 CLDN18P56856 261 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 EEFSECP57772 596 aaKnown RBP6.71□□□□□ -1.34
NUP88-205ENST00000572809 POU6F2P78424 691 aaPredicted RBP6.71□□□□□ -1.34
NUP88-205ENST00000572809 FOXF2Q12947 444 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 MYBPHQ13203 477 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 SNTB1Q13884 538 aaKnown RBP6.71□□□□□ -1.34
NUP88-205ENST00000572809 GANABQ14697 944 aaKnown RBP6.71□□□□□ -1.34
NUP88-205ENST00000572809 LASP1Q14847 261 aaKnown RBP6.71□□□□□ -1.34
NUP88-205ENST00000572809 PDCD2Q16342 344 aaPredicted RBP6.71□□□□□ -1.34
NUP88-205ENST00000572809 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.71□□□□□ -1.34
NUP88-205ENST00000572809 PGS1Q32NB8 556 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 FBXL19-AS1Q494R0 122 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 SPDYE7PQ495Y7 208 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 HHATQ5VTY9 493 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 RAET1LQ5VY80 246 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 GALNT10Q86SR1 603 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 UBQLNLQ8IYU4 475 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 KIRREL3Q8IZU9 778 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 COX18Q8N8Q8 333 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 C9orf106Q8NAJ2 232 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 OR56A1Q8NGH5 318 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 OR5M1Q8NGP8 315 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 PSMA8Q8TAA3 256 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 CHAC2Q8WUX2 184 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 JADE3Q92613 823 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 RNASE6Q93091 150 aaKnown RBP6.71□□□□□ -1.34
NUP88-205ENST00000572809 OTUB1Q96FW1 271 aaPredicted RBP6.71□□□□□ -1.34
NUP88-205ENST00000572809 ZFP3Q96NJ6 502 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 STACQ99469 402 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 SORT1Q99523 831 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 SH3GL2Q99962 352 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 PIGQQ9BRB3 760 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 G6PC3Q9BUM1 346 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 BTBD2Q9BX70 525 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 ACTRT3Q9BYD9 372 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 CXorf36Q9H7Y0 433 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 UBQLN4Q9NRR5 601 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 DUSP22Q9NRW4 184 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 PNPOQ9NVS9 261 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 ASIC5Q9NY37 505 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 FAF1Q9UNN5 650 aaPredicted RBP6.71□□□□□ -1.34
NUP88-205ENST00000572809 L3MBTL1Q9Y468 752 aa6.71□□□□□ -1.34
NUP88-205ENST00000572809 APCP25054 2843 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 IGLV3-32A0A0A0MS00 114 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 OR2M5A3KFT3 312 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 H3BML4 177 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 SCDO00767 359 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 OXSR1O95747 527 aaPredicted RBP6.7□□□□□ -1.34
NUP88-205ENST00000572809 F13BP05160 661 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 SCG5P05408 212 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 NGFRP08138 427 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 KRT16P08779 473 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 JUNBP17275 347 aaPredicted RBP6.7□□□□□ -1.34
NUP88-205ENST00000572809 LBPP18428 481 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 POU3F2P20265 443 aaPredicted RBP6.7□□□□□ -1.34
NUP88-205ENST00000572809 ATP6V1C1P21283 382 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 SUCLG1P53597 346 aaKnown RBP6.7□□□□□ -1.34
NUP88-205ENST00000572809 CLDN15P56746 228 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 C21orf58P58505 322 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 EEF1A1P68104 462 aaKnown RBP6.7□□□□□ -1.34
NUP88-205ENST00000572809 HBA1P69905 142 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 BST1Q10588 318 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 TP53BP2Q13625 1128 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 DPY19L1Q2PZI1 675 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 FBLN7Q53RD9 439 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 CCNJQ5T5M9 372 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 EEF1A1P5Q5VTE0 462 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 OR4F3Q6IEY1 312 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 CDC73Q6P1J9 531 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 BHLHB9Q6PI77 547 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 PLXDC2Q6UX71 529 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 P4HA3Q7Z4N8 544 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 C6orf120Q7Z4R8 191 aa6.7□□□□□ -1.34
NUP88-205ENST00000572809 CAMKMTQ7Z624 323 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms