RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 NUDT14O95848 222 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 LIFP15018 202 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 PGCP20142 388 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 ELAVL4P26378 380 aaKnown RBP9.44□□□□□ -0.9
USP3-219ENST00000561326 ITPKBP27987 946 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 MSX1P28360 303 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 RYKP34925 604 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 CAPGP40121 348 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 DAPP51397 102 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 RPS6KA3P51812 740 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 UGT2B15P54855 530 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 MLF1P58340 268 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 IL1RL1Q01638 556 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 MERTKQ12866 999 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 COX10Q12887 443 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 SNTA1Q13424 505 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 IL10RAQ13651 578 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 ATP1A4Q13733 1029 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 LAPTM4AQ15012 233 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 MEP1AQ16819 746 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 ZNF791Q3KP31 576 aaPredicted RBP9.44□□□□□ -0.9
USP3-219ENST00000561326 NHSL2Q5HYW2 709 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 DCAF10Q5QP82 559 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 SWT1Q5T5J6 900 aaKnown RBP9.44□□□□□ -0.9
USP3-219ENST00000561326 FNDC7Q5VTL7 733 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 SLC22A10Q63ZE4 541 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 WBP2NLQ6ICG8 309 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 FAHD1Q6P587 224 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 PODNL1Q6PEZ8 512 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 IL20RBQ6UXL0 311 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 APOOLQ6UXV4 268 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 GDF7Q7Z4P5 450 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 MARCH3Q86UD3 253 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 GATSQ8NAP1 163 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 FAM71CQ8NEG0 241 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 SLC7A13Q8TCU3 470 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 ADAMTS17Q8TE56 1095 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 CYGBQ8WWM9 190 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 ACOT11Q8WXI4 607 aaPredicted RBP9.44□□□□□ -0.9
USP3-219ENST00000561326 HGDQ93099 445 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 THOC3Q96J01 351 aaKnown RBP9.44□□□□□ -0.9
USP3-219ENST00000561326 MPP4Q96JB8 637 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 CCNL2Q96S94 520 aaPredicted RBP9.44□□□□□ -0.9
USP3-219ENST00000561326 PRR14Q9BWN1 585 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 METTL7AQ9H8H3 244 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 CTPS2Q9NRF8 586 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 PAPOLBQ9NRJ5 636 aaKnown RBP9.44□□□□□ -0.9
USP3-219ENST00000561326 STMN3Q9NZ72 180 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 FLRT3Q9NZU0 649 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 SLC7A7Q9UM01 511 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 CARD8Q9Y2G2 431 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 MRPS18BQ9Y676 258 aaKnown RBP9.44□□□□□ -0.9
USP3-219ENST00000561326 CPAMD8Q8IZJ3 1885 aa9.44□□□□□ -0.9
USP3-219ENST00000561326 HTR3EA5X5Y0 456 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 CHP2O43745 196 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 SCO2O43819 266 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 ADAP00813 363 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 CELA2AP08217 269 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 PNMTP11086 282 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 GSTM3P21266 225 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 HTR2AP28223 471 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 SOX3P41225 446 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 IDH2P48735 452 aaKnown RBP9.43□□□□□ -0.9
USP3-219ENST00000561326 RNF144AP50876 292 aaPredicted RBP9.43□□□□□ -0.9
USP3-219ENST00000561326 P2RX1P51575 399 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 CCR4P51679 360 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 FOXC1Q12948 553 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 SKP2Q13309 424 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 CBFBQ13951 182 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 TGIF1Q15583 401 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 TBC1D25Q3MII6 688 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 ZIK1Q3SY52 487 aaPredicted RBP9.43□□□□□ -0.9
USP3-219ENST00000561326 ALG10BQ5I7T1 473 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 ACER2Q5QJU3 275 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 C6orf52Q5T4I8 152 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 ABHD17BQ5VST6 288 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 SLC30A6Q6NXT4 461 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 TTC33Q6PID6 262 aaPredicted RBP9.43□□□□□ -0.9
USP3-219ENST00000561326 LYPD8Q6UX82 237 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 APLFQ8IW19 511 aaPredicted RBP9.43□□□□□ -0.9
USP3-219ENST00000561326 GPALPP1Q8IXQ4 340 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 CADM2Q8N3J6 435 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 AQP11Q8NBQ7 271 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 OR4K5Q8NGD3 323 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 OR5W2Q8NH69 310 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 B4GALNT2Q8NHY0 566 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 ZNF563Q8TA94 476 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 PIGXQ8TBF5 258 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 GNPDA2Q8TDQ7 276 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 GRHL3Q8TE85 626 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 DUSP19Q8WTR2 217 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 TMEM234Q8WY98 164 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 TFAP2CQ92754 450 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 SGCZQ96LD1 299 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 BARD1Q99728 777 aaKnown RBP9.43□□□□□ -0.9
USP3-219ENST00000561326 ADI1Q9BV57 179 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 UCK2Q9BZX2 261 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 LHPPQ9H008 270 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 TOR3AQ9H497 397 aa9.43□□□□□ -0.9
USP3-219ENST00000561326 MAN2C1Q9NTJ4 1040 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms