RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 PRG2P13727 222 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 NID1P14543 1247 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 ABOP16442 354 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 ZNF708P17019 499 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 PRKCAP17252 672 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 PRDX6P30041 224 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 ACAA2P42765 397 aaKnown RBP10.33□□□□□ -0.76
SNX1-204ENST00000559061 ANXA11P50995 505 aaKnown RBP10.33□□□□□ -0.76
SNX1-204ENST00000559061 P2RX1P51575 399 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 SUCLG1P53597 346 aaKnown RBP10.33□□□□□ -0.76
SNX1-204ENST00000559061 CRISP3P54108 245 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 CLDN20P56880 219 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 KCNJ10P78508 379 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 DMTNQ08495 405 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 SCARB2Q14108 478 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 GANABQ14697 944 aaKnown RBP10.33□□□□□ -0.76
SNX1-204ENST00000559061 TOMM20Q15388 145 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 CTU2Q2VPK5 515 aaKnown RBP10.33□□□□□ -0.76
SNX1-204ENST00000559061 PRAMEF8Q5VWM4 474 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 PRAMEF7Q5VXH5 474 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 HACD2Q6Y1H2 254 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 ADGRE4PQ86SQ3 457 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 SERPINA11Q86U17 422 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 FJX1Q86VR8 437 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 IFNEQ86WN2 208 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 SLC15A3Q8IY34 581 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 GTPBP8Q8N3Z3 284 aaPredicted RBP10.33□□□□□ -0.76
SNX1-204ENST00000559061 ZNF527Q8NB42 609 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 GPR32P1Q8NGA4 272 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 OR52P1PQ8NH57 321 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 WDR60Q8WVS4 1066 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 CCDC120Q96HB5 630 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 RAD21L1Q9H4I0 556 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 PIF1Q9H611 641 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 LDAHQ9H6V9 325 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 MTHFD2LQ9H903 347 aaPredicted RBP10.33□□□□□ -0.76
SNX1-204ENST00000559061 SDHAF3Q9NRP4 125 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 MEMO1Q9Y316 297 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 ZNF337Q9Y3M9 751 aa10.33□□□□□ -0.76
SNX1-204ENST00000559061 DIDO1Q9BTC0 2240 aaKnown RBP10.32□□□□□ -0.76
SNX1-204ENST00000559061 A0A0G2JPF8 293 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 HNRNPCL2B2RXH8 293 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 HNRNPCL3B7ZW38 293 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 FRS3O43559 492 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 EIF4E2O60573 245 aaKnown RBP10.32□□□□□ -0.76
SNX1-204ENST00000559061 HNRNPCL1O60812 293 aaKnown RBP10.32□□□□□ -0.76
SNX1-204ENST00000559061 CSTAP01040 98 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 NPPAP01160 153 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 DBIP07108 87 aaKnown RBP10.32□□□□□ -0.76
SNX1-204ENST00000559061 THBS1P07996 1170 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 PABPC4LP0CB38 370 aaKnown RBP10.32□□□□□ -0.76
SNX1-204ENST00000559061 HNRNPCL4P0DMR1 293 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 T-ENOLP0DO92 83 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 HPGDP15428 266 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 CHMP24386 653 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 MSX1P28360 303 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 AQP1P29972 269 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 PCGF2P35227 344 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 CLK3P49761 638 aaKnown RBP10.32□□□□□ -0.76
SNX1-204ENST00000559061 SUMO3P55854 103 aaPredicted RBP10.32□□□□□ -0.76
SNX1-204ENST00000559061 HPCAP84074 193 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 KCNC4Q03721 635 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 QPRTQ15274 297 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 MMEL1Q495T6 779 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 GLYR1Q49A26 553 aaPredicted RBP10.32□□□□□ -0.76
SNX1-204ENST00000559061 ACSF3Q4G176 576 aaPredicted RBP10.32□□□□□ -0.76
SNX1-204ENST00000559061 SLC25A53Q5H9E4 307 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 RNF220Q5VTB9 566 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 REEP3Q6NUK4 255 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 MED12LQ86YW9 2145 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 ULK2Q8IYT8 1036 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 TOR1AIP2Q8NFQ8 470 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 OR5W2Q8NH69 310 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 BBS10Q8TAM1 723 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 ABTB1Q969K4 478 aaPredicted RBP10.32□□□□□ -0.76
SNX1-204ENST00000559061 TAMM41Q96BW9 452 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 ADGRG7Q96K78 797 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 RNF145Q96MT1 663 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 SFXN2Q96NB2 322 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 TUBA1CQ9BQE3 449 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 THUMPD3Q9BV44 507 aaKnown RBP10.32□□□□□ -0.76
SNX1-204ENST00000559061 EXOSC3Q9NQT5 275 aaKnown RBP10.32□□□□□ -0.76
SNX1-204ENST00000559061 THUMPD1Q9NXG2 353 aaKnown RBP10.32□□□□□ -0.76
SNX1-204ENST00000559061 ABCD2Q9UBJ2 740 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 CORO2BQ9UQ03 480 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 PCNX1Q96RV3 2341 aa10.32□□□□□ -0.76
SNX1-204ENST00000559061 DOPEY1Q5JWR5 2465 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 A0A087WZY1 265 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 EVPLLA8MZ36 301 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 FAM220BPB1ANY3 271 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 BCKDKO14874 412 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 TPST2O60704 377 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 MFN2O95140 757 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 ACTL6AO96019 429 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 OPN1SWP03999 348 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 GKN3PP0CG01 181 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 ETS2P15036 469 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 CPN1P15169 458 aa10.31□□□□□ -0.76
SNX1-204ENST00000559061 ZNF17P17021 662 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms