RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 B8ZZF3 427 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 DNAJC8O75937 253 aaPredicted RBP19.32■□□□□ 0.68
CASC4-204ENST00000557945 HK1P19367 917 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 RYKP34925 604 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 ZNF41P51814 821 aaPredicted RBP19.32■□□□□ 0.68
CASC4-204ENST00000557945 SUMO3P55854 103 aaPredicted RBP19.32■□□□□ 0.68
CASC4-204ENST00000557945 PLAURQ03405 335 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 GLIPR1L2Q4G1C9 344 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 CMPK2Q5EBM0 449 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 ZNF324BQ6AW86 544 aaPredicted RBP19.32■□□□□ 0.68
CASC4-204ENST00000557945 ARSKQ6UWY0 536 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 YRDCQ86U90 279 aaKnown RBP19.32■□□□□ 0.68
CASC4-204ENST00000557945 ZNF440Q8IYI8 595 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 OR5W2Q8NH69 310 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 KLHDC3Q9BQ90 382 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 PCDHAC1Q9H158 963 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 LDAHQ9H6V9 325 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 EXOSC3Q9NQT5 275 aaKnown RBP19.32■□□□□ 0.68
CASC4-204ENST00000557945 KLHL28Q9NXS3 571 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 TAS2R10Q9NYW0 307 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 VDAC3Q9Y277 283 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 RPH3AQ9Y2J0 694 aaPredicted RBP19.32■□□□□ 0.68
CASC4-204ENST00000557945 CHST2Q9Y4C5 530 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 WISP2O76076 250 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 GKN3PP0CG01 181 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 ME2P23368 584 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 CRYBA2P53672 197 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 CBFBQ13951 182 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 GANABQ14697 944 aaKnown RBP19.32■□□□□ 0.68
CASC4-204ENST00000557945 DUSP7Q16829 419 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 CYBRD1Q53TN4 286 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 WIPI1Q5MNZ9 446 aaPredicted RBP19.32■□□□□ 0.68
CASC4-204ENST00000557945 FAM83FQ8NEG4 500 aaPredicted RBP19.32■□□□□ 0.68
CASC4-204ENST00000557945 RASSF5Q8WWW0 418 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 MCUR1Q96AQ8 359 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 RSPO3Q9BXY4 272 aaPredicted RBP19.32■□□□□ 0.68
CASC4-204ENST00000557945 SLC6A15Q9H2J7 730 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 MED17Q9NVC6 651 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 MAGEL2Q9UJ55 1249 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 SNX13Q9Y5W8 968 aa19.32■□□□□ 0.68
CASC4-204ENST00000557945 CFAP73A6NFT4 308 aa19.31■□□□□ 0.68
CASC4-204ENST00000557945 FRS3O43559 492 aa19.31■□□□□ 0.68
CASC4-204ENST00000557945 C1QL1O75973 258 aa19.31■□□□□ 0.68
CASC4-204ENST00000557945 SERPINA1P01009 418 aa19.31■□□□□ 0.68
CASC4-204ENST00000557945 HPNP05981 417 aa19.31■□□□□ 0.68
CASC4-204ENST00000557945 LINGO3P0C6S8 592 aa19.31■□□□□ 0.68
CASC4-204ENST00000557945 SLC6A8P48029 635 aa19.31■□□□□ 0.68
CASC4-204ENST00000557945 KCNJ5P48544 419 aa19.31■□□□□ 0.68
CASC4-204ENST00000557945 NCALDP61601 193 aa19.31■□□□□ 0.68
CASC4-204ENST00000557945 BNIP2Q12982 314 aa19.31■□□□□ 0.68
CASC4-204ENST00000557945 ZNF550Q7Z398 422 aa19.31■□□□□ 0.68
CASC4-204ENST00000557945 COMTD1Q86VU5 262 aa19.31■□□□□ 0.68
CASC4-204ENST00000557945 GRAMD2AQ8IUY3 354 aa19.31■□□□□ 0.68
CASC4-204ENST00000557945 GPR32P1Q8NGA4 272 aa19.31■□□□□ 0.68
CASC4-204ENST00000557945 GPR119Q8TDV5 335 aa19.31■□□□□ 0.68
CASC4-204ENST00000557945 CCDC124Q96CT7 223 aaKnown RBP19.31■□□□□ 0.68
CASC4-204ENST00000557945 TPD52L3Q96J77 140 aa19.31■□□□□ 0.68
CASC4-204ENST00000557945 GPR137Q96N19 417 aa19.31■□□□□ 0.68
CASC4-204ENST00000557945 OR2B2Q9GZK3 357 aa19.31■□□□□ 0.68
CASC4-204ENST00000557945 ACKR4Q9NPB9 350 aa19.31■□□□□ 0.68
CASC4-204ENST00000557945 ADPRHL2Q9NX46 363 aa19.31■□□□□ 0.68
CASC4-204ENST00000557945 LIPGQ9Y5X9 500 aa19.31■□□□□ 0.68
CASC4-204ENST00000557945 A0A087WZY1 265 aa19.3■□□□□ 0.68
CASC4-204ENST00000557945 TRGV5A0A0B4J1U4 118 aa19.3■□□□□ 0.68
CASC4-204ENST00000557945 AP3D1O14617 1153 aa19.3■□□□□ 0.68
CASC4-204ENST00000557945 ARPC2O15144 300 aa19.3■□□□□ 0.68
CASC4-204ENST00000557945 GSC2O15499 205 aa19.3■□□□□ 0.68
CASC4-204ENST00000557945 ZIC3O60481 467 aa19.3■□□□□ 0.68
CASC4-204ENST00000557945 ZNF682O95780 498 aa19.3■□□□□ 0.68
CASC4-204ENST00000557945 EPPINO95925 133 aa19.3■□□□□ 0.68
CASC4-204ENST00000557945 PGCP20142 388 aa19.3■□□□□ 0.68
CASC4-204ENST00000557945 CD247P20963 164 aa19.3■□□□□ 0.68
CASC4-204ENST00000557945 QPRTQ15274 297 aa19.3■□□□□ 0.68
CASC4-204ENST00000557945 TOMM34Q15785 309 aaPredicted RBP19.3■□□□□ 0.68
CASC4-204ENST00000557945 KRTCAP3Q53RY4 240 aa19.3■□□□□ 0.68
CASC4-204ENST00000557945 RAET1LQ5VY80 246 aa19.3■□□□□ 0.68
CASC4-204ENST00000557945 ZNF563Q8TA94 476 aa19.3■□□□□ 0.68
CASC4-204ENST00000557945 PROX1Q92786 737 aa19.3■□□□□ 0.68
CASC4-204ENST00000557945 BARD1Q99728 777 aaKnown RBP19.3■□□□□ 0.68
CASC4-204ENST00000557945 SLX1AQ9BQ83 275 aa19.3■□□□□ 0.68
CASC4-204ENST00000557945 CADM1Q9BY67 442 aaKnown RBP19.3■□□□□ 0.68
CASC4-204ENST00000557945 LRMDAQ9H2I8 198 aa19.3■□□□□ 0.68
CASC4-204ENST00000557945 BAG5Q9UL15 447 aa19.3■□□□□ 0.68
CASC4-204ENST00000557945 NCKAP5O14513 1909 aa19.29■□□□□ 0.68
CASC4-204ENST00000557945 SHISA8B8ZZ34 492 aa19.29■□□□□ 0.68
CASC4-204ENST00000557945 SYT5O00445 386 aa19.29■□□□□ 0.68
CASC4-204ENST00000557945 ADAM11O75078 769 aa19.29■□□□□ 0.68
CASC4-204ENST00000557945 FESP07332 822 aa19.29■□□□□ 0.68
CASC4-204ENST00000557945 PRG2P13727 222 aa19.29■□□□□ 0.68
CASC4-204ENST00000557945 UQCRBP14927 111 aa19.29■□□□□ 0.68
CASC4-204ENST00000557945 RGS8P57771 180 aaPredicted RBP19.29■□□□□ 0.68
CASC4-204ENST00000557945 HOXC5Q00444 222 aa19.29■□□□□ 0.68
CASC4-204ENST00000557945 EPS8Q12929 822 aa19.29■□□□□ 0.68
CASC4-204ENST00000557945 FXNQ16595 210 aa19.29■□□□□ 0.68
CASC4-204ENST00000557945 TRILQ7L0X0 811 aa19.29■□□□□ 0.68
CASC4-204ENST00000557945 SPPL2CQ8IUH8 684 aa19.29■□□□□ 0.68
CASC4-204ENST00000557945 GHDCQ8N2G8 530 aa19.29■□□□□ 0.68
CASC4-204ENST00000557945 OR5M1Q8NGP8 315 aa19.29■□□□□ 0.68
CASC4-204ENST00000557945 OR10Q1Q8NGQ4 319 aa19.29■□□□□ 0.68
CASC4-204ENST00000557945 LZICQ8WZA0 190 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms