RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 HPCAL1P37235 193 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 BDKRB1P46663 353 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 ARHGDIBP52566 201 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 TNFRSF17Q02223 184 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 PAX8Q06710 450 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 PUDPQ08623 228 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 RIPPLY1Q0D2K3 151 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 IL18R1Q13478 541 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 TPSAB1Q15661 275 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 TEX44Q53QW1 395 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 NLRP9Q7RTR0 991 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 PRSS48Q7RTY5 328 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 SH2D6Q7Z4S9 175 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 SLC38A6Q8IZM9 456 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 SLC22A18ASQ8N1D0 253 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 MTURNQ8N3F0 131 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 MAIP1Q8WWC4 291 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 FAM3CQ92520 227 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 TPD52L3Q96J77 140 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 C18orf12Q96KH6 178 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 C12orf66Q96MD2 445 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 ZNF599Q96NL3 588 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 AMDHD1Q96NU7 426 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 RBM14Q96PK6 669 aaKnown RBP3.46□□□□□ -1.86
PRPF39-210ENST00000556718 PLIN2Q99541 437 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 NPAS2Q99743 824 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 PYGO2Q9BRQ0 406 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 CCDC28BQ9BUN5 200 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 UFSP2Q9NUQ7 469 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 IMPAD1Q9NX62 359 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 RCOR3Q9P2K3 495 aaPredicted RBP3.46□□□□□ -1.86
PRPF39-210ENST00000556718 PCSK1NQ9UHG2 260 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 CDH9Q9ULB4 789 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 OARD1Q9Y530 152 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 PLEKHG2Q9H7P9 1386 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 LRRC9Q6ZRR7 1453 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 ARAP1Q96P48 1450 aa3.46□□□□□ -1.86
PRPF39-210ENST00000556718 SCRIBQ14160 1630 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 TRAV26-1A0A087WT03 109 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 A0A0J9YWU9 116 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 EFCAB7A8K855 629 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 SEMA4FO95754 770 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 PNMA6AP0CW24 399 aaPredicted RBP3.45□□□□□ -1.86
PRPF39-210ENST00000556718 NCF2P19878 526 aaPredicted RBP3.45□□□□□ -1.86
PRPF39-210ENST00000556718 IGFBP5P24593 272 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 GRIA1P42261 906 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 RND3P61587 244 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 LMO4P61968 165 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 CD300CQ08708 224 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 TMED1Q13445 227 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 PEX6Q13608 980 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 MXD4Q14582 209 aaPredicted RBP3.45□□□□□ -1.86
PRPF39-210ENST00000556718 SLC10A1Q14973 349 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 NDUFA9Q16795 377 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 PPP1R3AQ16821 1122 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 C17orf58Q2M2W7 97 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 GGTA1PQ4G0N0 100 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 KCTD21Q4G0X4 260 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 ZSCAN25Q6NSZ9 544 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 FAM71F2Q6NXP2 309 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 FAHD2BQ6P2I3 314 aaPredicted RBP3.45□□□□□ -1.86
PRPF39-210ENST00000556718 STAC2Q6ZMT1 411 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 VSTM4Q8IW00 320 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 MCOLN2Q8IZK6 566 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 SPAG16Q8N0X2 631 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 ABHD12Q8N2K0 398 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 C15orf54Q8N8G6 183 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 NECAB1Q8N987 351 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 CSNK1G2-AS1Q8NCQ2 148 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 OR4D5Q8NGN0 318 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 OR4Q3Q8NH05 313 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 ZNF671Q8TAW3 534 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 M1APQ8TC57 530 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 FBXO32Q969P5 355 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 ZBED6CLQ96FA7 236 aaPredicted RBP3.45□□□□□ -1.86
PRPF39-210ENST00000556718 FAHD2AQ96GK7 314 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 COQ2Q96H96 371 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 CNDP1Q96KN2 507 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 OR5B2Q96R09 309 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 EDEM2Q9BV94 578 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 HCAR1Q9BXC0 346 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 PKIBQ9C010 78 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 TRIM15Q9C019 465 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 FN3KRPQ9HA64 309 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 NANSQ9NR45 359 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 ZNF446Q9NWS9 450 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 HYPKQ9NX55 129 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 NKTRP30414 1462 aaKnown RBP3.45□□□□□ -1.86
PRPF39-210ENST00000556718 CAMSAP2Q08AD1 1489 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 RAPGEF2Q9Y4G8 1499 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 EIF4G1Q04637 1599 aaKnown RBP3.45□□□□□ -1.86
PRPF39-210ENST00000556718 CTTNBP2Q8WZ74 1663 aa3.45□□□□□ -1.86
PRPF39-210ENST00000556718 FRMPD4Q14CM0 1322 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 BLMP54132 1417 aaPredicted RBP3.44□□□□□ -1.86
PRPF39-210ENST00000556718 SPATA31E1Q6ZUB1 1445 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 POLR1AO95602 1720 aaPredicted RBP3.44□□□□□ -1.86
PRPF39-210ENST00000556718 VIRMAQ69YN4 1812 aaKnown RBP3.44□□□□□ -1.86
PRPF39-210ENST00000556718 SCAF11Q99590 1463 aaKnown RBP3.44□□□□□ -1.86
PRPF39-210ENST00000556718 CECR2Q9BXF3 1484 aa3.44□□□□□ -1.86
PRPF39-210ENST00000556718 USP47Q96K76 1375 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms