RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 SPAARA0A1B0GVQ0 90 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 A8MUA0 341 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 CDC40O60508 579 aaKnown RBP eCLIP9.97□□□□□ -0.81
PABPN1-203ENST00000553960 REM1O75628 298 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 SEC24DO94855 1032 aaPredicted RBP9.97□□□□□ -0.81
PABPN1-203ENST00000553960 OR6B1O95007 311 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 DIRAS1O95057 198 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 NTN1O95631 604 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 SNAP29O95721 258 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 TSPAN19P0C672 248 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 LIPCP11150 499 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 OSMP13725 252 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 HTR2AP28223 471 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 RBMS1P29558 406 aaKnown RBP9.97□□□□□ -0.81
PABPN1-203ENST00000553960 EVI2BP34910 448 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 SLC1A3P43003 542 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 HTR3AP46098 478 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 OMPP47874 163 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 CLK3P49761 638 aaKnown RBP9.97□□□□□ -0.81
PABPN1-203ENST00000553960 P2RX1P51575 399 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 NUP107P57740 925 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 TAS2R41P59536 307 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 ISL1P61371 349 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 GABREP78334 506 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 PRKCDQ05655 676 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 KCNAB2Q13303 367 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 SEC23BQ15437 767 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 KCTD21Q4G0X4 260 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 C3orf38Q5JPI3 329 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 SLC30A6Q6NXT4 461 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 PGBD2Q6P3X8 592 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 PODNL1Q6PEZ8 512 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 DEF8Q6ZN54 512 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 RASSF6Q6ZTQ3 369 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 ZER1Q7Z7L7 766 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 PRSS58Q8IYP2 241 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 SETD9Q8NE22 299 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 OR5W2Q8NH69 310 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 PAQR8Q8TEZ7 354 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 THAP4Q8WY91 577 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 ST8SIA1Q92185 356 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 RASL10BQ96S79 203 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 ADOQ96SZ5 270 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 MBOAT4Q96T53 435 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 BARD1Q99728 777 aaKnown RBP9.97□□□□□ -0.81
PABPN1-203ENST00000553960 RNF32Q9H0A6 362 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 TOR3AQ9H497 397 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 SMURF2Q9HAU4 748 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 SDHAF3Q9NRP4 125 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 KRT84Q9NSB2 600 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 PNPLA3Q9NST1 481 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 WDR70Q9NW82 654 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 DLL3Q9NYJ7 618 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 CNIH4Q9P003 139 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 DKK4Q9UBT3 224 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 MRPS18CQ9Y3D5 142 aaKnown RBP9.97□□□□□ -0.81
PABPN1-203ENST00000553960 MAGED1Q9Y5V3 778 aaPredicted RBP9.97□□□□□ -0.81
PABPN1-203ENST00000553960 U3KQV3 271 aa9.97□□□□□ -0.81
PABPN1-203ENST00000553960 PMS2P1A4D2B8 440 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 CLDN24A6NM45 220 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 ZAR1LA6NP61 321 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 TP53I11O14683 189 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 MPZL2O60487 215 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 ADAM11O75078 769 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 ICOSLGO75144 302 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 GASTP01350 101 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 TP53P04637 393 aaPredicted RBP9.96□□□□□ -0.82
PABPN1-203ENST00000553960 CCDC159P0C7I6 412 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 PRG2P13727 222 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 HPGDP15428 266 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 PRKACGP22612 351 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 ADH6P28332 368 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 NOVA1P51513 510 aaKnown RBP9.96□□□□□ -0.82
PABPN1-203ENST00000553960 CHN2P52757 468 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 EFNB1P98172 346 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 PDK3Q15120 406 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 CD226Q15762 336 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 BTBD16Q32M84 506 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 ZNF691Q5VV52 312 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 SHISA6Q6ZSJ9 500 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 PLEKHM3Q6ZWE6 761 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 OLIG3Q7RTU3 272 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 THAP5Q7Z6K1 395 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 RPS19BP1Q86WX3 136 aaKnown RBP9.96□□□□□ -0.82
PABPN1-203ENST00000553960 APLFQ8IW19 511 aaPredicted RBP9.96□□□□□ -0.82
PABPN1-203ENST00000553960 HS3ST5Q8IZT8 346 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 ATG16L2Q8NAA4 619 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 ZNF555Q8NEP9 628 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 GNPDA2Q8TDQ7 276 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 PSMF1Q92530 271 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 EFHD2Q96C19 240 aaPredicted RBP9.96□□□□□ -0.82
PABPN1-203ENST00000553960 GAL3ST4Q96RP7 486 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 UCK2Q9BZX2 261 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 SLC25A19Q9HC21 320 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 PLCXD1Q9NUJ7 323 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 P4HTMQ9NXG6 502 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 FLRT3Q9NZU0 649 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 CHCHD2Q9Y6H1 151 aaPredicted RBP9.96□□□□□ -0.82
PABPN1-203ENST00000553960 SPEGQ15772 3267 aa9.96□□□□□ -0.82
PABPN1-203ENST00000553960 CPAMD8Q8IZJ3 1885 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms