RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 WWP2O00308 870 aa12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 BHLHE40O14503 412 aa12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 DCNP07585 359 aaKnown RBP12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 CPEP16870 476 aa12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 BMP7P18075 431 aa12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 RBM34P42696 430 aaKnown RBP12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 ARL4DP49703 201 aa12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 DMWDQ09019 674 aa12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 NNATQ16517 81 aa12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 RGS21Q2M5E4 152 aa12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 LIPKQ5VXJ0 399 aa12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 RPL13AP3Q6NVV1 102 aa12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 BMP8AQ7Z5Y6 402 aa12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 PLXDC1Q8IUK5 500 aa12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 CPOQ8IVL8 374 aa12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 CMIPQ8IY22 773 aa12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 SLC35F3Q8IY50 421 aa12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 CENPSQ8N2Z9 138 aa12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 BBS1Q8NFJ9 593 aa12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 OR7G1Q8NGA0 311 aa12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 COX4I2Q96KJ9 171 aa12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 ZNF426Q9BUY5 554 aa12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 YIPF2Q9BWQ6 316 aa12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 ERVMER34-1Q9H9K5 563 aa12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 EXOSC4Q9NPD3 245 aaKnown RBP12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 HINT3Q9NQE9 182 aaKnown RBP12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 FAIMQ9NVQ4 179 aa12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 H2AFY2Q9P0M6 372 aaPredicted RBP12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 COLQQ9Y215 455 aaPredicted RBP12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 CFL2Q9Y281 166 aa12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 MMACHCQ9Y4U1 282 aa12.93□□□□□ -0.34
RAB3IP-216ENST00000552199 C17orf105B2RV13 164 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 DUX1O43812 170 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 PTP4A3O75365 173 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 RFPL3O75679 317 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 LIMS3P0CW19 117 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 LIMS4P0CW20 117 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 GIMD1P0DJR0 217 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 GLB1P16278 677 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 ALAS2P22557 587 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 SOX6P35712 828 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 OR2G6Q5TZ20 316 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 LINC00114Q6XXX2 140 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 CXXC5Q7LFL8 322 aaKnown RBP12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 SHFQ7M4L6 423 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 LNX2Q8N448 690 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 ZSCAN1Q8NBB4 408 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 OR13C2Q8NGS9 318 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 PTPMT1Q8WUK0 201 aaPredicted RBP12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 MVB12AQ96EY5 273 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 SENP5Q96HI0 755 aaPredicted RBP12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 ASPNQ9BXN1 380 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 C6orf62Q9GZU0 229 aaPredicted RBP12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 FN3KQ9H479 309 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 GALNT8Q9NY28 637 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 SEMA5BQ9P283 1151 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 GMEB2Q9UKD1 530 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 SSR3Q9UNL2 185 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 SIGLEC7Q9Y286 467 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 SERINC4A6NH21 518 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 SOCS6O14544 535 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 PFDN1O60925 122 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 ATXN8OSP0DMR3 200 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 SAGP10523 405 aaPredicted RBP12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 OR1D4P47884 311 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 PPP5CP53041 499 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 TUBA3EQ6PEY2 450 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 SMARCD3Q6STE5 483 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 THSD4Q6ZMP0 1018 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 D2HGDHQ8N465 521 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 Q8N9G6 341 aaPredicted RBP12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 OR4F15Q8NGB8 312 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 OR4C3Q8NH37 302 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 OR1L3Q8NH93 324 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 GATAD2BQ8WXI9 593 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 ABTB1Q969K4 478 aaPredicted RBP12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 OR1F2PQ96R84 312 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 PHOX2BQ99453 314 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 PNO1Q9NRX1 252 aaKnown RBP12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 TBCCD1Q9NVR7 557 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 ETAA1Q9NY74 926 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 SIT1Q9Y3P8 196 aa12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 SPIN1Q9Y657 262 aaPredicted RBP12.92□□□□□ -0.34
RAB3IP-216ENST00000552199 ANKRD33BA6NCL7 494 aa12.91□□□□□ -0.34
RAB3IP-216ENST00000552199 EFCAB7A8K855 629 aa12.91□□□□□ -0.34
RAB3IP-216ENST00000552199 TAF4O00268 1085 aa12.91□□□□□ -0.34
RAB3IP-216ENST00000552199 HCN1O60741 890 aa12.91□□□□□ -0.34
RAB3IP-216ENST00000552199 TSPAN19P0C672 248 aa12.91□□□□□ -0.34
RAB3IP-216ENST00000552199 CD40LGP29965 261 aa12.91□□□□□ -0.34
RAB3IP-216ENST00000552199 CSF2RBP32927 897 aa12.91□□□□□ -0.34
RAB3IP-216ENST00000552199 SLC1A3P43003 542 aa12.91□□□□□ -0.34
RAB3IP-216ENST00000552199 GPLD1P80108 840 aa12.91□□□□□ -0.34
RAB3IP-216ENST00000552199 IFITM3Q01628 133 aa12.91□□□□□ -0.34
RAB3IP-216ENST00000552199 ZP2Q05996 745 aa12.91□□□□□ -0.34
RAB3IP-216ENST00000552199 TPBGQ13641 420 aa12.91□□□□□ -0.34
RAB3IP-216ENST00000552199 ATP1A4Q13733 1029 aa12.91□□□□□ -0.34
RAB3IP-216ENST00000552199 DSG2Q14126 1118 aa12.91□□□□□ -0.34
RAB3IP-216ENST00000552199 ALG10BQ5I7T1 473 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms