RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, human

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-223	ENST00000543658	SULF2	Q8IWU5	870 aa		10.85	□□□□□ -0.67
DDB1-223	ENST00000543658	FAM71C	Q8NEG0	241 aa		10.85	□□□□□ -0.67
DDB1-223	ENST00000543658	OR5W2	Q8NH69	310 aa		10.85	□□□□□ -0.67
DDB1-223	ENST00000543658	RNF217	Q8TC41	542 aa		10.85	□□□□□ -0.67
DDB1-223	ENST00000543658	NR4A3	Q92570	626 aa		10.85	□□□□□ -0.67
DDB1-223	ENST00000543658	MCHR1	Q99705	422 aa		10.85	□□□□□ -0.67
DDB1-223	ENST00000543658	ZNF559	Q9BR84	538 aa		10.85	□□□□□ -0.67
DDB1-223	ENST00000543658	MFRP	Q9BY79	579 aa		10.85	□□□□□ -0.67
DDB1-223	ENST00000543658	HES7	Q9BYE0	225 aa		10.85	□□□□□ -0.67
DDB1-223	ENST00000543658	DSN1	Q9H410	356 aa		10.85	□□□□□ -0.67
DDB1-223	ENST00000543658	DENND2D	Q9H6A0	471 aa	Predicted RBP	10.85	□□□□□ -0.67
DDB1-223	ENST00000543658	TMEM27	Q9HBJ8	222 aa		10.85	□□□□□ -0.67
DDB1-223	ENST00000543658	TAS2R10	Q9NYW0	307 aa		10.85	□□□□□ -0.67
DDB1-223	ENST00000543658	MED11	Q9P086	117 aa		10.85	□□□□□ -0.67
DDB1-223	ENST00000543658	ASPM	Q8IZT6	3477 aa		10.85	□□□□□ -0.67
DDB1-223	ENST00000543658	CPSF4L	A6NMK7	179 aa	Known RBP	10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	hCG_2039718	K7EN88	272 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	GNGT2	O14610	69 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	CDC40	O60508	579 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	FKBP6	O75344	327 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	CBR3	O75828	277 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	RASAL1	O95294	804 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	GP1BB	P13224	206 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	GDF1	P27539	372 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	SLC7A1	P30825	629 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	GCK	P35557	465 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	GAS1	P54826	345 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	TAS2R41	P59536	307 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	EPS8	Q12929	822 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	LINC00303	Q3SY05	128 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	TIGD3	Q6B0B8	471 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	CBLN3	Q6UW01	205 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	SLC22A16	Q86VW1	577 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	ADGRG5	Q8IZF4	528 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	CADM2	Q8N3J6	435 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	FAM86B1	Q8N7N1	296 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	OR6T1	Q8NGN1	323 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	CANT1	Q8WVQ1	401 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	TMEM234	Q8WY98	164 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	RTN4R	Q9BZR6	473 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	TRIM2	Q9C040	744 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	POLR2J2	Q9GZM3	115 aa	Known RBP	10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	POLR2J3	Q9H1A7	115 aa	Known RBP	10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	ZFP64	Q9NPA5	681 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	ZNF71	Q9NQZ8	489 aa	Predicted RBP	10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	DEPP	Q9NTK1	212 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	TUBA8	Q9NY65	449 aa	Predicted RBP	10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	B3GNT3	Q9Y2A9	372 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	CSAG2	Q9Y5P2	127 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	MPDZ	O75970	2070 aa		10.84	□□□□□ -0.67
DDB1-223	ENST00000543658	IGLV3-32	A0A0A0MS00	114 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658		A0A0G2JMM0	328 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658		A0A1W2PPB8	328 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658		A0A1W2PRS3	328 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	KIR3DP1	A8MWS1	328 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	ERVH48-1	M5A8F1	160 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	FMO6P	O60774	539 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	TRIM3	O75382	744 aa	Predicted RBP	10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	EPPIN	O95925	133 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	PDGFA	P04085	211 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	FCGR1A	P12314	374 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	IDH2	P48735	452 aa	Known RBP	10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	CD97	P48960	835 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	DSCR4	P56555	118 aa	Predicted RBP	10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	SPIB	Q01892	262 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	INA	Q16352	499 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658		Q6ZS92	163 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	OR2M3	Q8NG83	312 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	PYDC1	Q8WXC3	89 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	PRRC1	Q96M27	445 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	FRMD6	Q96NE9	622 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	ZNF347	Q96SE7	839 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	FNDC11	Q9BVV2	318 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	TTTY12	Q9BZ98	90 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	AMBRA1	Q9C0C7	1298 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	PROK2	Q9HC23	129 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	IL1RAP	Q9NPH3	570 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	CCM2L	Q9NUG4	571 aa	Predicted RBP	10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	PRDM4	Q9UKN5	801 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	ICAM5	Q9UMF0	924 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	VDAC3	Q9Y277	283 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	C15orf41	Q9Y2V0	281 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	RRP15	Q9Y3B9	282 aa	Known RBP	10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	CHST2	Q9Y4C5	530 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	AP4S1	Q9Y587	144 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	ENPP4	Q9Y6X5	453 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658	CHD8	Q9HCK8	2581 aa		10.83	□□□□□ -0.68
DDB1-223	ENST00000543658		A0A087WZY1	265 aa		10.82	□□□□□ -0.68
DDB1-223	ENST00000543658	C17orf51	A8MQB3	221 aa		10.82	□□□□□ -0.68
DDB1-223	ENST00000543658	FAM166B	A8MTA8	275 aa		10.82	□□□□□ -0.68
DDB1-223	ENST00000543658	FAAH	O00519	579 aa		10.82	□□□□□ -0.68
DDB1-223	ENST00000543658	TFEC	O14948	347 aa	Predicted RBP	10.82	□□□□□ -0.68
DDB1-223	ENST00000543658	ADAMDEC1	O15204	470 aa		10.82	□□□□□ -0.68
DDB1-223	ENST00000543658	HNRNPR	O43390	633 aa	Known RBP	10.82	□□□□□ -0.68
DDB1-223	ENST00000543658	OIP5	O43482	229 aa		10.82	□□□□□ -0.68
DDB1-223	ENST00000543658	ENTPD5	O75356	428 aa		10.82	□□□□□ -0.68
DDB1-223	ENST00000543658	BCAS1	O75363	584 aa	Predicted RBP	10.82	□□□□□ -0.68
DDB1-223	ENST00000543658	TRAPPC6A	O75865	159 aa		10.82	□□□□□ -0.68
DDB1-223	ENST00000543658	CST1	P01037	141 aa		10.82	□□□□□ -0.68

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