RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 NFU1Q9UMS0 254 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 SNX12Q9UMY4 172 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 SNX6Q9UNH7 406 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 PPP2R2CQ9Y2T4 447 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 HEATR1Q9H583 2144 aaKnown RBP6.83□□□□□ -1.32
NXF1-215ENST00000533440 A0A096LPK6 155 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 IGHV3-15A0A0B4J1V0 119 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 A0A0G2JK05 382 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 GNG14A0A1W2PPG7 69 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 A0A1W2PQD3 144 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 LRP5LA4QPB2 252 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 GOLGA6L6A8MZA4 724 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 C9JVG2 144 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 M0R1B8 84 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 KIF2AO00139 706 aaPredicted RBP6.83□□□□□ -1.32
NXF1-215ENST00000533440 CYTIPO60759 359 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 LILRA1O75019 489 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 RAD51DO75771 328 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 OTCP00480 354 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 RPS17P08708 135 aaKnown RBP6.83□□□□□ -1.32
NXF1-215ENST00000533440 TACSTD2P09758 323 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 CHN1P15882 459 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 DDCP20711 480 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 TIA1P31483 386 aaKnown RBP eCLIP6.83□□□□□ -1.32
NXF1-215ENST00000533440 IL2RGP31785 369 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 GSTM5P46439 218 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 PRIM2P49643 509 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 PHC1P78364 1004 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 CHRNEQ04844 493 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 RASGEF1BQ0VAM2 473 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 NAB1Q13506 487 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 TRADDQ15628 312 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 CD226Q15762 336 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 TMEM176BQ3YBM2 270 aaPredicted RBP6.83□□□□□ -1.32
NXF1-215ENST00000533440 SPIN4Q56A73 249 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 FBXW9Q5XUX1 488 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 KLC3Q6P597 504 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 RPS27LQ71UM5 84 aaKnown RBP6.83□□□□□ -1.32
NXF1-215ENST00000533440 ZAR1Q86SH2 424 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 KLHL7Q8IXQ5 586 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 PLD6Q8N2A8 252 aaKnown RBP6.83□□□□□ -1.32
NXF1-215ENST00000533440 LINC01356Q8N9X3 169 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 B4GALNT2Q8NHY0 566 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 FBXO27Q8NI29 283 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 ZNF483Q8TF39 744 aaPredicted RBP6.83□□□□□ -1.32
NXF1-215ENST00000533440 FAM216AQ8WUB2 273 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 HPS1Q92902 700 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 GCDHQ92947 438 aaPredicted RBP6.83□□□□□ -1.32
NXF1-215ENST00000533440 ZNF775Q96BV0 537 aaPredicted RBP6.83□□□□□ -1.32
NXF1-215ENST00000533440 APIPQ96GX9 242 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 SH3YL1Q96HL8 342 aaPredicted RBP6.83□□□□□ -1.32
NXF1-215ENST00000533440 MUS81Q96NY9 551 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 ZNF300Q96RE9 604 aaPredicted RBP6.83□□□□□ -1.32
NXF1-215ENST00000533440 TRMOQ9BU70 441 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 ZNF696Q9H7X3 374 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 FKRPQ9H9S5 495 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 SIRT5Q9NXA8 310 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 TMCO1Q9UM00 188 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 SNX24Q9Y343 169 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 ACTL7BQ9Y614 415 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 ATP23Q9Y6H3 246 aa6.83□□□□□ -1.32
NXF1-215ENST00000533440 A0A1W2PR80 420 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 CIB4A0PJX0 185 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 MANBAO00462 879 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 OR4F21O95013 312 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 KCNK2O95069 426 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 STAMBPO95630 424 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 GIFP27352 417 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 LCN1P31025 176 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 ARFIP2P53365 341 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 DVL1P1P54792 670 aaPredicted RBP6.82□□□□□ -1.32
NXF1-215ENST00000533440 CDH13P55290 713 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 CDH15P55291 814 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 DEFA6Q01524 100 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 LGALS3BPQ08380 585 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 GABRA6Q16445 453 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 CARTPTQ16568 116 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 MROH9Q5TGP6 573 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 OR7E24Q6IFN5 339 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 GALNT5Q7Z7M9 940 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 ZNF100Q8IYN0 542 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 SLC35F6Q8N357 371 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 ANKS4BQ8N8V4 417 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 WDR31Q8NA23 367 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 OR6Y1Q8NGX8 325 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.82□□□□□ -1.32
NXF1-215ENST00000533440 GPR151Q8TDV0 419 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 FBF1Q8TES7 1133 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 FBXO17Q96EF6 278 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 AMDHD1Q96NU7 426 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 C1QTNF3Q9BXJ4 246 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 ACPTQ9BZG2 426 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 UBQLN4Q9NRR5 601 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 TAS2R16Q9NYV7 291 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 RNF14Q9UBS8 474 aa6.82□□□□□ -1.32
NXF1-215ENST00000533440 GPC6Q9Y625 555 aaPredicted RBP6.82□□□□□ -1.32
NXF1-215ENST00000533440 IGKV3D-15A0A087WSY6 115 aa6.81□□□□□ -1.32
NXF1-215ENST00000533440 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.81□□□□□ -1.32
NXF1-215ENST00000533440 NPIPA5A0A0B4J1W7 369 aa6.81□□□□□ -1.32
NXF1-215ENST00000533440 A0A1W2PNR3 127 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms