RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 EFR3AQ14156 821 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 TRAM2Q15035 370 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 TGIF1Q15583 401 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 ZSWIM7Q19AV6 140 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 RSPO4Q2I0M5 234 aaPredicted RBP6.16□□□□□ -1.42
PVT1-217ENST00000523190 RFX4Q33E94 735 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 SLC36A3Q495N2 470 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 PGBD2Q6P3X8 592 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 ISLR2Q6UXK2 745 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 ZNF550Q7Z398 422 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 MARCH3Q86UD3 253 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 MEX3DQ86XN8 651 aaKnown RBP6.16□□□□□ -1.42
PVT1-217ENST00000523190 RAB43Q86YS6 212 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 NKAIN4Q8IVV8 208 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 CADM2Q8N3J6 435 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 FAM71CQ8NEG0 241 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 OR4K5Q8NGD3 323 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 RNF217Q8TC41 542 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 SLC7A13Q8TCU3 470 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 GRHL3Q8TE85 626 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 TMEM255BQ8WV15 326 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 ZFAND2BQ8WV99 257 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 OIT3Q8WWZ8 545 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 TFAP2CQ92754 450 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 HGDQ93099 445 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 GTPBP3Q969Y2 492 aaKnown RBP6.16□□□□□ -1.42
PVT1-217ENST00000523190 SH3YL1Q96HL8 342 aaPredicted RBP6.16□□□□□ -1.42
PVT1-217ENST00000523190 RDH12Q96NR8 316 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 RASL10BQ96S79 203 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 KLHDC3Q9BQ90 382 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 PSD2Q9BQI7 771 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 ZNF559Q9BR84 538 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 GPR87Q9BY21 358 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 TBL1XR1Q9BZK7 514 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 POLR2J2Q9GZM3 115 aaKnown RBP6.16□□□□□ -1.42
PVT1-217ENST00000523190 POLR2J3Q9H1A7 115 aaKnown RBP6.16□□□□□ -1.42
PVT1-217ENST00000523190 CDCP1Q9H5V8 836 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 EVA1AQ9H8M9 152 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 TMEM27Q9HBJ8 222 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 P4HTMQ9NXG6 502 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 MYOTQ9UBF9 498 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 IL17BQ9UHF5 180 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 SLC7A7Q9UM01 511 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 CARD8Q9Y2G2 431 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 POFUT2Q9Y2G5 429 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 PCDHGB5Q9Y5G0 923 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 USP34Q70CQ2 3546 aa6.16□□□□□ -1.42
PVT1-217ENST00000523190 A0A0B4J2E0 115 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 A0A1B0GX12 115 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 A0A1W2PQD3 144 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 DCDC2BA2VCK2 349 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 PCNX2A6NKB5 2137 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 EIF4E1BA6NMX2 242 aaKnown RBP6.15□□□□□ -1.42
PVT1-217ENST00000523190 H0YAE9 185 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 H3BNH8 94 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 ADAM10O14672 748 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 ZNF264O43296 627 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 NDUFB5O43674 189 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 FADS1O60427 444 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 ITGA10O75578 1167 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 ANGPTL1O95841 491 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 ADAP00813 363 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 GASTP01350 101 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 NGFRP08138 427 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 GNAO1P09471 354 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 LINGO3P0C6S8 592 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 LIFP15018 202 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 CDH2P19022 906 aaPredicted RBP6.15□□□□□ -1.42
PVT1-217ENST00000523190 MYF6P23409 242 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 EPHA2P29317 976 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 SOX3P41225 446 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 TMED10P49755 219 aaKnown RBP6.15□□□□□ -1.42
PVT1-217ENST00000523190 CLK3P49761 638 aaKnown RBP6.15□□□□□ -1.42
PVT1-217ENST00000523190 TPD52P55327 224 aaPredicted RBP6.15□□□□□ -1.42
PVT1-217ENST00000523190 ZNF117Q03924 483 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 SRSF6Q13247 344 aaKnown RBP6.15□□□□□ -1.42
PVT1-217ENST00000523190 PDK3Q15120 406 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 B3GNTL1Q67FW5 361 aaPredicted RBP6.15□□□□□ -1.42
PVT1-217ENST00000523190 BICRALQ6AI39 1079 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 ZNF770Q6IQ21 691 aaPredicted RBP6.15□□□□□ -1.42
PVT1-217ENST00000523190 ZNF613Q6PF04 617 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 KLHL17Q6TDP4 642 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 CBLN3Q6UW01 205 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 ZNF730Q6ZMV8 503 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 WDR88Q6ZMY6 472 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 PRICKLE2Q7Z3G6 844 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 VASH2Q86V25 355 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 DTX1Q86Y01 620 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 ZNF440Q8IYI8 595 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 MARVELD2Q8N4S9 558 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 ZNF555Q8NEP9 628 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 ADAMTS17Q8TE56 1095 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 ACOT11Q8WXI4 607 aaPredicted RBP6.15□□□□□ -1.42
PVT1-217ENST00000523190 SLC38A4Q969I6 547 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 SLC35B4Q969S0 331 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 SPACA9Q96E40 222 aaPredicted RBP6.15□□□□□ -1.42
PVT1-217ENST00000523190 PRSS27Q9BQR3 290 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 OCSTAMPQ9BR26 566 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 GABARAPL3Q9BY60 117 aa6.15□□□□□ -1.42
PVT1-217ENST00000523190 ANKRD60Q9BZ19 345 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms