RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 CCDC7Q96M83 1385 aa3.35□□□□□ -1.87
CTNNA1-222ENST00000520400 COL18A1P39060 1754 aa3.35□□□□□ -1.87
CTNNA1-222ENST00000520400 COL14A1Q05707 1796 aaKnown RBP3.35□□□□□ -1.87
CTNNA1-222ENST00000520400 USP6P35125 1406 aa3.35□□□□□ -1.87
CTNNA1-222ENST00000520400 FAM168BA1KXE4 195 aa3.34□□□□□ -1.87
CTNNA1-222ENST00000520400 NEBLO76041 1014 aa3.34□□□□□ -1.87
CTNNA1-222ENST00000520400 NOL4O94818 638 aa3.34□□□□□ -1.87
CTNNA1-222ENST00000520400 DUSP14O95147 198 aaKnown RBP3.34□□□□□ -1.87
CTNNA1-222ENST00000520400 PGAM2P15259 253 aa3.34□□□□□ -1.87
CTNNA1-222ENST00000520400 ARF4P18085 180 aaPredicted RBP3.34□□□□□ -1.87
CTNNA1-222ENST00000520400 IGHV1-2P23083 117 aa3.34□□□□□ -1.87
CTNNA1-222ENST00000520400 MAGEA9P43362 315 aa3.34□□□□□ -1.87
CTNNA1-222ENST00000520400 TRPC1P48995 793 aa3.34□□□□□ -1.87
CTNNA1-222ENST00000520400 PEX6Q13608 980 aa3.34□□□□□ -1.87
CTNNA1-222ENST00000520400 INAQ16352 499 aa3.34□□□□□ -1.87
CTNNA1-222ENST00000520400 UTF1Q5T230 341 aa3.34□□□□□ -1.87
CTNNA1-222ENST00000520400 LANCL3Q6ZV70 420 aa3.34□□□□□ -1.87
CTNNA1-222ENST00000520400 HSD11B1LQ7Z5J1 315 aa3.34□□□□□ -1.87
CTNNA1-222ENST00000520400 C11orf42Q8N5U0 333 aa3.34□□□□□ -1.87
CTNNA1-222ENST00000520400 C4orf36Q96KX1 117 aa3.34□□□□□ -1.87
CTNNA1-222ENST00000520400 DEFB126Q9BYW3 111 aa3.34□□□□□ -1.87
CTNNA1-222ENST00000520400 OPN3Q9H1Y3 402 aaPredicted RBP3.34□□□□□ -1.87
CTNNA1-222ENST00000520400 MEAF6Q9HAF1 191 aa3.34□□□□□ -1.87
CTNNA1-222ENST00000520400 HPF1Q9NWY4 346 aa3.34□□□□□ -1.87
CTNNA1-222ENST00000520400 ELOVL2Q9NXB9 296 aa3.34□□□□□ -1.87
CTNNA1-222ENST00000520400 RDH8Q9NYR8 311 aa3.34□□□□□ -1.87
CTNNA1-222ENST00000520400 ATP6V1HQ9UI12 483 aa3.34□□□□□ -1.87
CTNNA1-222ENST00000520400 AURKCQ9UQB9 309 aa3.34□□□□□ -1.87
CTNNA1-222ENST00000520400 POLR3AO14802 1390 aaPredicted RBP3.34□□□□□ -1.88
CTNNA1-222ENST00000520400 ANKRD36BQ8N2N9 1353 aa3.34□□□□□ -1.88
CTNNA1-222ENST00000520400 GTF3C1Q12789 2109 aa3.34□□□□□ -1.88
CTNNA1-222ENST00000520400 SBF2Q86WG5 1849 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 A0A087WZY1 265 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 TRIM49BA6NDI0 452 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 SAGE2PA6NJ88 616 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 FAM74A7A6NL05 159 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 DUX1O43812 170 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 ANXA3P12429 323 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 DPP4P27487 766 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 GDF1P27539 372 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 MDH1P40925 334 aaKnown RBP3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 BDKRB1P46663 353 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 NOVA1P51513 510 aaKnown RBP3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 SLC25A1P53007 311 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 METAP1P53582 386 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 RPL8P62917 257 aaKnown RBP3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 PRKCEQ02156 737 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 PUDPQ08623 228 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 FAM74A3Q4VXF1 159 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 CYBRD1Q53TN4 286 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 DNAJC21Q5F1R6 531 aaKnown RBP3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 NIPAL3Q6P499 406 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 CBLN3Q6UW01 205 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 C9orf40Q8IXQ3 194 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 LYG1Q8N1E2 194 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 ANKRD20A12PQ8NF67 263 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 OR2T33Q8NG76 320 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 ZPLD1Q8TCW7 415 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 TBC1D31Q96DN5 1066 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 NOL4LQ96MY1 436 aaPredicted RBP3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 TBCDQ9BTW9 1192 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 COMMD4Q9H0A8 199 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 SLITRK2Q9H156 845 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 LPAR2Q9HBW0 351 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 PRR34Q9NV39 138 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 MOKQ9UQ07 419 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 L3MBTL1Q9Y468 752 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 MFHAS1Q9Y4C4 1052 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 SBNO1A3KN83 1393 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 ARHGEF10O15013 1369 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 CPSF1Q10570 1443 aaKnown RBP3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 EDC4Q6P2E9 1401 aaKnown RBP3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 FAM208AQ9UK61 1670 aaKnown RBP3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 ITGB4P16144 1822 aa3.33□□□□□ -1.88
CTNNA1-222ENST00000520400 NUDT21O43809 227 aaKnown RBP3.32□□□□□ -1.88
CTNNA1-222ENST00000520400 RAMP1O60894 148 aa3.32□□□□□ -1.88
CTNNA1-222ENST00000520400 B3GAT3O94766 335 aa3.32□□□□□ -1.88
CTNNA1-222ENST00000520400 PAX7P23759 505 aa3.32□□□□□ -1.88
CTNNA1-222ENST00000520400 CDH5P33151 784 aaPredicted RBP3.32□□□□□ -1.88
CTNNA1-222ENST00000520400 ZNF154Q13106 437 aa3.32□□□□□ -1.88
CTNNA1-222ENST00000520400 SCGB2A2Q13296 93 aa3.32□□□□□ -1.88
CTNNA1-222ENST00000520400 ASAH1Q13510 395 aa3.32□□□□□ -1.88
CTNNA1-222ENST00000520400 CAMK4Q16566 473 aa3.32□□□□□ -1.88
CTNNA1-222ENST00000520400 DEFB115Q30KQ5 88 aa3.32□□□□□ -1.88
CTNNA1-222ENST00000520400 KRT71Q3SY84 523 aa3.32□□□□□ -1.88
CTNNA1-222ENST00000520400 SBK1Q52WX2 424 aa3.32□□□□□ -1.88
CTNNA1-222ENST00000520400 ARSKQ6UWY0 536 aa3.32□□□□□ -1.88
CTNNA1-222ENST00000520400 ZNF677Q86XU0 584 aa3.32□□□□□ -1.88
CTNNA1-222ENST00000520400 GPR137CQ8N3F9 429 aa3.32□□□□□ -1.88
CTNNA1-222ENST00000520400 BPIFB2Q8N4F0 458 aa3.32□□□□□ -1.88
CTNNA1-222ENST00000520400 OR5AU1Q8NGC0 362 aa3.32□□□□□ -1.88
CTNNA1-222ENST00000520400 OR9A4Q8NGU2 314 aa3.32□□□□□ -1.88
CTNNA1-222ENST00000520400 CCDC26Q8TAB7 109 aa3.32□□□□□ -1.88
CTNNA1-222ENST00000520400 TADA1Q96BN2 335 aa3.32□□□□□ -1.88
CTNNA1-222ENST00000520400 HPDLQ96IR7 371 aa3.32□□□□□ -1.88
CTNNA1-222ENST00000520400 POLR3FQ9H1D9 316 aaPredicted RBP3.32□□□□□ -1.88
CTNNA1-222ENST00000520400 EXOSC3Q9NQT5 275 aaKnown RBP3.32□□□□□ -1.88
CTNNA1-222ENST00000520400 ABCD2Q9UBJ2 740 aa3.32□□□□□ -1.88
CTNNA1-222ENST00000520400 AP4B1Q9Y6B7 739 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms