RNA–Protein interactions for RNA: ENST00000515198.5

PTCD2-210, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-210ENST00000515198 CORO2BQ9UQ03 480 aa11.27□□□□□ -0.61
PTCD2-210ENST00000515198 L3MBTL1Q9Y468 752 aa11.27□□□□□ -0.61
PTCD2-210ENST00000515198 GPC6Q9Y625 555 aaPredicted RBP11.27□□□□□ -0.61
PTCD2-210ENST00000515198 USP9YO00507 2555 aaPredicted RBP11.27□□□□□ -0.61
PTCD2-210ENST00000515198 ASH1LQ9NR48 2969 aaKnown RBP11.27□□□□□ -0.61
PTCD2-210ENST00000515198 SPTBN1Q01082 2364 aaKnown RBP11.26□□□□□ -0.61
PTCD2-210ENST00000515198 MED12Q93074 2177 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 CENPVL1A0A0U1RR11 272 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 PRAMEF27A3QJZ7 478 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 NKX2-6A6NCS4 301 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 KDM4EB2RXH2 506 aaPredicted RBP11.26□□□□□ -0.61
PTCD2-210ENST00000515198 SHISA8B8ZZ34 492 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 DVL2O14641 736 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 ANGPT2O15123 496 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 OIP5O43482 229 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 BCHEP06276 602 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 CHRM4P08173 479 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 LINGO3P0C6S8 592 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 UBTFL6P0CB48 400 aaPredicted RBP11.26□□□□□ -0.61
PTCD2-210ENST00000515198 IL7RP16871 459 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 HOXB9P17482 250 aaPredicted RBP11.26□□□□□ -0.61
PTCD2-210ENST00000515198 ADH6P28332 368 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 GRNP28799 593 aaKnown RBP11.26□□□□□ -0.61
PTCD2-210ENST00000515198 RAC1P63000 192 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 KCNJ10P78508 379 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 SKP2Q13309 424 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 MAPK14Q16539 360 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 PAGE3Q5JUK9 113 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 PDSS1Q5T2R2 415 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 P4HA3Q7Z4N8 544 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 ADGRE4PQ86SQ3 457 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 CMIPQ8IY22 773 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 PEX5LQ8IYB4 626 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 WDR60Q8WVS4 1066 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 ARSGQ96EG1 525 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 THUMPD3Q9BV44 507 aaKnown RBP11.26□□□□□ -0.61
PTCD2-210ENST00000515198 PINK1Q9BXM7 581 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 SLC38A1Q9H2H9 487 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 RUBCNLQ9H714 662 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 CACYBPQ9HB71 228 aaKnown RBP11.26□□□□□ -0.61
PTCD2-210ENST00000515198 KLHL14Q9P2G3 628 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 CLCF1Q9UBD9 225 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 ZNF629Q9UEG4 869 aaPredicted RBP11.26□□□□□ -0.61
PTCD2-210ENST00000515198 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.26□□□□□ -0.61
PTCD2-210ENST00000515198 NDUFAF1Q9Y375 327 aa11.26□□□□□ -0.61
PTCD2-210ENST00000515198 CACNA1CQ13936 2221 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 KIAA1549Q9HCM3 1950 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 AGAP5A6NIR3 686 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 EVPLLA8MZ36 301 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 HNRNPRO43390 633 aaKnown RBP11.25□□□□□ -0.61
PTCD2-210ENST00000515198 DBIP07108 87 aaKnown RBP11.25□□□□□ -0.61
PTCD2-210ENST00000515198 SNRPB2P08579 225 aaKnown RBP11.25□□□□□ -0.61
PTCD2-210ENST00000515198 TFPTP0C1Z6 253 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 TMIGD3P0DMS9 266 aaPredicted RBP11.25□□□□□ -0.61
PTCD2-210ENST00000515198 PRKCAP17252 672 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 PGCP20142 388 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 CTSSP25774 331 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 PSMA4P25789 261 aaKnown RBP11.25□□□□□ -0.61
PTCD2-210ENST00000515198 ELK4P28324 431 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 OPRM1P35372 400 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 PGM1P36871 562 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 SUCLG1P53597 346 aaKnown RBP11.25□□□□□ -0.61
PTCD2-210ENST00000515198 CLDN15P56746 228 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 CLDN20P56880 219 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 SF3A3Q12874 501 aaKnown RBP eCLIP11.25□□□□□ -0.61
PTCD2-210ENST00000515198 FOXF1Q12946 379 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 QPRTQ15274 297 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 SGCBQ16585 318 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 ZNF787Q6DD87 383 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 CGB2Q6NT52 195 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 METTL25Q8N6Q8 603 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 C9orf106Q8NAJ2 232 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 NAXEQ8NCW5 288 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 FBXO27Q8NI29 283 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 POC1BQ8TC44 478 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 SLC38A5Q8WUX1 472 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 TMEM234Q8WY98 164 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 ZG16BQ96DA0 208 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 LRRC46Q96FV0 321 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 MRGPRX4Q96LA9 322 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 DOCK7Q96N67 2140 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 HS3ST6Q96QI5 342 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 NPAS1Q99742 590 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 KLHDC3Q9BQ90 382 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 UCK2Q9BZX2 261 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 QRSL1Q9H0R6 528 aaKnown RBP11.25□□□□□ -0.61
PTCD2-210ENST00000515198 PAQR5Q9NXK6 330 aaPredicted RBP11.25□□□□□ -0.61
PTCD2-210ENST00000515198 SLC25A37Q9NYZ2 338 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 VAPAQ9P0L0 249 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 SLAMF8Q9P0V8 285 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 HCFC1P51610 2035 aa11.25□□□□□ -0.61
PTCD2-210ENST00000515198 SPTAN1Q13813 2472 aaKnown RBP11.24□□□□□ -0.61
PTCD2-210ENST00000515198 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.24□□□□□ -0.61
PTCD2-210ENST00000515198 A0A0G2JPF8 293 aa11.24□□□□□ -0.61
PTCD2-210ENST00000515198 SLC22A20A6NK97 555 aa11.24□□□□□ -0.61
PTCD2-210ENST00000515198 GJE1A6NN92 205 aa11.24□□□□□ -0.61
PTCD2-210ENST00000515198 HNRNPCL2B2RXH8 293 aa11.24□□□□□ -0.61
PTCD2-210ENST00000515198 HNRNPCL3B7ZW38 293 aa11.24□□□□□ -0.61
PTCD2-210ENST00000515198 C5orf58C9J3I9 102 aa11.24□□□□□ -0.61
PTCD2-210ENST00000515198 EIF1AYO14602 144 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms